CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0001130201
(
Schistocephalus solidus
)
C2H2 ZF,Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
PF00046 (Homeobox)
IPR007087
IPR001356
SSLN_0001130201
T076409_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0001130201-mRNA-1
C2H2 ZF
146
167
ACGQCGKRFANIYRLQRHHLSH
SSLN_0001130201-mRNA-1
C2H2 ZF
176
198
FKCEQCSKAFKFKHHLKEHARIH
SSLN_0001130201-mRNA-1
C2H2 ZF
204
225
FVCLQCGKRFSHSGSYSSHTSS
SSLN_0001130201-mRNA-1
Homeodomain
331
387
RRARSVIRPDQANLLRAYYRVNQLPTASELQRLASAADLRTKVVRVWFQNARSRDRK
SSLN_0001130201-mRNA-1
C2H2 ZF
760
782
FVCRTCSKAFKHKHHLTEHRRLH
SSLN_0001130201-mRNA-1
C2H2 ZF
788
809
FECHRCGKRFSHSGSYSQHMNM
Links
Other
C2H2 ZF,Homeodomain
family TFs
Other
Schistocephalus solidus
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPER_0001575501
Spirometra erinaceieuropaei
SPER_0001575501
N
0.734