CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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rgr
(
Drosophila melanogaster
)
C2H2 ZF,MADF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
PF10545 (MADF_DNA_bdg)
IPR007087
IPR006578
FBgn0267792
T076577_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Is expressed in embryonic/larval posterior spiracle; mesoderm; and pole plasm. [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0087772
MADF
302
387
LLREYERTEKLWNPRHPDYKYNAKRSAYGDLAGPLESICHRQLSGAEIFAVLKELRCRYRRELKKVNALGGKYKSRLWYFERMDFL
FBpp0087772
MADF
433
518
ILDAFKRQECLWNPQHYDYTTCCKTELFRDISVQLQEELNYELSGEECCNEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDEMEFL
FBpp0087772
MADF
562
649
FVEIYHNYSALWDVDHPDFRSNTYRSQALGQMLDEINTTFHTSYTAEQLEKTLFNLRKEFSAQKRKILTESEDSSSIPLLHAKLAEFL
FBpp0087772
C2H2 ZF
684
706
FICTLCGKGFQMPCNLTVHIRRH
FBpp0087772
C2H2 ZF
712
734
YSCEQCDKRFATSTEVAIHLRTH
FBpp0087772
C2H2 ZF
740
762
YICDLCGKSFKTWSFFDIHRRRH
FBpp0087772
C2H2 ZF
768
790
FHCPICAKGFYEKNRFTDHMNSH
FBpp0087772
C2H2 ZF
796
818
HLCTVCGKTFTTYGNLKKHTELH
FBpp0087772
C2H2 ZF
824
847
YKCGTCGKRFAQFASLRWHKKREH
FBpp0308449
MADF
335
420
LLREYERTEKLWNPRHPDYKYNAKRSAYGDLAGPLESICHRQLSGAEIFAVLKELRCRYRRELKKVNALGGKYKSRLWYFERMDFL
FBpp0308449
MADF
466
551
ILDAFKRQECLWNPQHYDYTTCCKTELFRDISVQLQEELNYELSGEECCNEIQKLRTRYRKELRMVIKHKGLYLPKLWCYDEMEFL
FBpp0308449
MADF
595
682
FVEIYHNYSALWDVDHPDFRSNTYRSQALGQMLDEINTTFHTSYTAEQLEKTLFNLRKEFSAQKRKILTESEDSSSIPLLHAKLAEFL
FBpp0308449
C2H2 ZF
717
739
FICTLCGKGFQMPCNLTVHIRRH
FBpp0308449
C2H2 ZF
745
767
YSCEQCDKRFATSTEVAIHLRTH
FBpp0308449
C2H2 ZF
773
795
YICDLCGKSFKTWSFFDIHRRRH
FBpp0308449
C2H2 ZF
801
823
FHCPICAKGFYEKNRFTDHMNSH
FBpp0308449
C2H2 ZF
829
851
HLCTVCGKTFTTYGNLKKHTELH
FBpp0308449
C2H2 ZF
857
880
YKCGTCGKRFAQFASLRWHKKREH
Links
Other
C2H2 ZF,MADF
family TFs
Other
Drosophila melanogaster
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy