CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CpipJ_CPIJ012530
(
Culex pipiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CpipJ_CPIJ012530
T077770_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.796
0.928
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.796
0.928
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.796
0.928
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.788
0.891
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.788
0.891
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ012530-RA
C2H2 ZF
235
257
FACPECGKVFNAHYNLTRHMPVH
CpipJ_CPIJ012530-RA
C2H2 ZF
263
285
FICKICGKGFRQASTLCRHKIIH
CpipJ_CPIJ012530-RA
C2H2 ZF
291
313
HKCQTCGKAFNRSSTLNTHTRIH
CpipJ_CPIJ012530-RA
C2H2 ZF
319
341
YICEYCGKGFHQKGNYKNHKLTH
CpipJ_CPIJ012530-RA
C2H2 ZF
347
369
YKCNICNKAFHQVYNLTFHMHTH
CpipJ_CPIJ012530-RA
C2H2 ZF
375
398
FTCKICAKGFCRNFDLKKHMRKLH
Links
Other
C2H2 ZF
family TFs
Other
Culex pipiens
TFs
167 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy