CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CpipJ_CPIJ015908
(
Culex pipiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
CpipJ_CPIJ015908
T077920_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cbt
M03705_2.00
Drosophila melanogaster
DMCACRCCCMY
RKGGGYGTGKH
SELEX
Nitta et al.(2015)
cbt_1
0.789
0.855
cbt
M03706_2.00
Drosophila melanogaster
RMCRCGCCCMCHH
DDGKGGGCGYGKY
SELEX
Nitta et al.(2015)
cbt_2
0.789
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CpipJ_CPIJ015908-RA
C2H2 ZF
269
293
YECEHPNCGKNYFKSSHLKAHQRIH
CpipJ_CPIJ015908-RA
C2H2 ZF
299
323
FICKWADCGRRFSRSDELSRHKRTH
CpipJ_CPIJ015908-RA
C2H2 ZF
329
351
FVCPVCQRRFMRSDHLSKHVKRH
Links
Other
C2H2 ZF
family TFs
Other
Culex pipiens
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy