CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_16458
(
Rhizopus oryzae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
RO3G_16458
T078227_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.763
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_16457
C2H2 ZF
13
35
YKCPLCPKSFFRLEHKKRHIRIH
RO3T_16457
C2H2 ZF
41
65
HACHYPGCDKRFSRSDELIRHGRTH
Links
Other
C2H2 ZF
family TFs
Other
Rhizopus oryzae
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy