CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04451
(
Verticillium albo atrum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
VDBG_04451
T078389_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04451T0
C2H2 ZF
531
554
FECQLCFQAKKFNKPSDWTKHVHE
VDBG_04451T0
C2H2 ZF
559
586
FTCTWDRCRDPKIFKRKADWVRHENEGH
VDBG_04451T0
C2H2 ZF
592
617
WTCDVEDCTHTCYRRDNFLQHLVREH
VDBG_04451T0
C2H2 ZF
657
678
PCRFCGKSFPSWKKLTVHLAKH
Links
Other
C2H2 ZF
family TFs
Other
Verticillium albo atrum
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_04451
Verticillium alfalfae
VDBG_04451
N
0.827
VDAG_08766
Verticillium dahliae
VDAG_08766
N
0.827
THITE_2121754
Thielavia terrestris
THITE_2121754
N
0.826
UCREL1_1189
Eutypa lata
UCREL1_1189
N
0.823
PFICI_01354
Pestalotiopsis fici
PFICI_01354
N
0.801
GMDG_06139
Pseudogymnoascus destructans
GMDG_06139
N
0.799
OIDMADRAFT_178171
Oidiodendron maius
OIDMADRAFT_178171
N
0.782