AGAP004517 (Anopheles gambiae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AGAP004517 T080403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
hkb
M03710_2.00
Drosophila melanogaster
VTCACGCCYHHN

NDDRGGCGTGAB
SELEX
Nitta et al.(2015)
hkb_1
0.796 0.899
hkb
M06470_2.00
Drosophila melanogaster
TCACGCCYM

KRGGCGTGA
B1H
Mathelier et al.(2014)
MA0450.1
0.796 0.899
hkb
M06168_2.00
Drosophila melanogaster
TCACGCCYM

KRGGCGTGA
B1H
Zhu et al.(2011)
hkb_NAR_FBgn0001204
0.796 0.899
hkb
M09666_2.00
Drosophila melanogaster
YMACGCCCMY

RKGGGCGTKR
Misc
Kulakovskiy et al.(2009)
hkb
0.796 0.899
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AGAP004517-PA C2H2 ZF 180 202
AGAP004517-PA C2H2 ZF 208 232
AGAP004517-PA C2H2 ZF 238 260

Links

Other C2H2 ZF family TFs
Other Anopheles gambiae TFs

45 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TCM_007543 Theobroma cacao TCM_007543 I 0.000
SapurV1A.0344s0360 Salix purpurea SapurV1A.0344s0360 I 0.000
Gorai.005G217400 Gossypium raimondii Gorai.005G217400 N 0.000
evm.TU.supercontig_63.29 Carica papaya evm.TU.supercontig_63.29 N 0.000
Eucgr.I02695 Eucalyptus grandis Eucgr.I02695 N 0.000
Ciclev10002538m.g Citrus clementina Ciclev10002538m.g N 0.000
Carubv10027198m.g Capsella rubella Carubv10027198m.g N 0.000
chr6.CM0314.510.nd Lotus japonicus chr6.CM0314.510.nd N 0.000
Cagra.0248s0135 Capsella grandiflora Cagra.0248s0135 N 0.000
Bostr.0568s0345 Boechera stricta Bostr.0568s0345 N 0.000
Aquca_022_00269 Aquilegia coerulea Aquca_022_00269 N 0.000
Cucsa.345830 Cucumis sativus Cucsa.345830 N 0.000
Gorai.008G014700 Gossypium raimondii Gorai.008G014700 N 0.000
Gorai.013G063500 Gossypium raimondii Gorai.013G063500 N 0.000
chr4.CM0337.760.nc Lotus japonicus chr4.CM0337.760.nc N 0.000
PK12901.1 Cannabis sativa PK12901.1 N 0.000
Thhalv10004805m.g Eutrema salsugineum Thhalv10004805m.g N 0.000
orange1.1g029016m.g Citrus sinensis orange1.1g029016m.g N 0.000
MDP0000250487 Malus domestica MDP0000250487 N 0.000
MDP0000240094 Malus domestica MDP0000240094 N 0.000
Lus10035648.g Linum usitatissimum Lus10035648.g N 0.000
Lus10035647.g Linum usitatissimum Lus10035647.g N 0.000
Lus10010747.g Linum usitatissimum Lus10010747.g N 0.000
Lus10000206.g Linum usitatissimum Lus10000206.g N 0.000
cassava1502.valid.m1 Manihot esculenta cassava1502.valid.m1 N 0.000
29683.m000467 Ricinus communis 29683.m000467 N 0.000
Pm004078 Prunus mume Pm004078 N 0.000
GLYMA08G19300 Glycine max GLYMA08G19300 N 0.000
GLYMA08G08010 Glycine max GLYMA08G08010 N 0.000
GLYMA06G15990 Glycine max GLYMA06G15990 N 0.000
GLYMA05G24910 Glycine max GLYMA05G24910 N 0.000
ANAC104 Arabidopsis lyrata fgenesh2_kg.8__2481__AT5G64530.1 N 0.000
Bra037779 Brassica rapa Bra037779 N 0.000
Bra031915 Brassica rapa Bra031915 N 0.000
Bo9g018140 Brassica oleracea Bo9g018140 N 0.000
Bo3g101220 Brassica oleracea Bo3g101220 N 0.000
Bo2g166280 Brassica oleracea Bo2g166280 N 0.000
GLYMA15G05690 Glycine max GLYMA15G05690 N 0.000
MTR_4g094302 Medicago truncatula MTR_4g094302 N 0.000
Cla009592 Citrullus lanatus Cla009592 N 0.000
Ca_05227 Cicer arietinum Ca_05227 N 0.000
ANAC104 Vitis vinifera VIT_12s0055g00510 N 0.000
VIT_04s0044g01500 Vitis vinifera VIT_04s0044g01500 N 0.000
Solyc01g104900.2 Solanum lycopersicum Solyc01g104900.2 N 0.000
PRUPE_ppa019508mg Prunus persica PRUPE_ppa019508mg N 0.000
POPTR_0007s04250 Populus trichocarpa POPTR_0007s04250 N 0.000
POPTR_0003s01720 Populus trichocarpa POPTR_0003s01720 N 0.000
POPTR_0001s21440 Populus trichocarpa POPTR_0001s21440 N 0.000
PGSC0003DMG400029741 Solanum tuberosum PGSC0003DMG400029741 N 0.000
NAC104 Arabidopsis thaliana AT5G64530 N 0.000