AMTR_s00024p00098860 (Amborella trichopoda)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AMTR_s00024p00098860 T080676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SGR5
M06805_2.00
Arabidopsis thaliana
WTTTTGTCTTWTHYD

HRDAWAAGACAAAAW
Dap-seq
OMalley et al.(2016)
SGR5_col_a
0.782 0.907
SGR5
M06806_2.00
Arabidopsis thaliana
WTTTGTCTYWWHBNN

NNVDWWRAGACAAAW
Dap-seq
OMalley et al.(2016)
SGR5_colamp_a
0.782 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN11050 C2H2 ZF 152 173
ERN11050 C2H2 ZF 173 199

Links

Other C2H2 ZF family TFs
Other Amborella trichopoda TFs

133 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Alligator_sinensis_CCG010046.1 Alligator sinensis Alligator_sinensis_CCG010046.1 N 0.000
Aqu1.211340 Amphimedon queenslandica Aqu1.211340 N 0.000
ANCCAN_04327 Ancylostoma caninum ANCCAN_04327 N 0.000
ANCCEY_00583 Ancylostoma ceylanicum ANCCEY_00583 N 0.000
ANCDUO_24135 Ancylostoma duodenale ANCDUO_24135 N 0.000
ANCDUO_17822 Ancylostoma duodenale ANCDUO_17822 N 0.000
ANCDUO_27140 Ancylostoma duodenale ANCDUO_27140 N 0.000
AALB008493 Anopheles albimanus AALB008493 N 0.000
AARA011013 Anopheles arabiensis AARA011013 N 0.000
ACHR009374 Anopheles christyi ACHR009374 N 0.000
ACUA008906 Anopheles culicifacies ACUA008906 N 0.000
ACUA028082 Anopheles culicifacies ACUA028082 N 0.000
ACUA018702 Anopheles culicifacies ACUA018702 N 0.000
AEPI004511 Anopheles epiroticus AEPI004511 N 0.000
AFUN001004 Anopheles funestus AFUN001004 N 0.000
AFUN010567 Anopheles funestus AFUN010567 N 0.000
AGAP011712 Anopheles gambiae AGAP011712 N 0.000
AMEM014364 Anopheles merus AMEM014364 N 0.000
AMIN000991 Anopheles minimus AMIN000991 N 0.000
AQUA010449 Anopheles quadriannulatus AQUA010449 N 0.000
AQUA000257 Anopheles quadriannulatus AQUA000257 N 0.000
ASTEI10438 Anopheles stephensi ASTEI10438 N 0.000
Afo_R005342 Aptenodytes forsteri Afo_R005342 N 0.000
ACEP16128 Atta cephalotes ACEP16128 N 0.000
ACEP18777 Atta cephalotes ACEP18777 N 0.000
ACEP16054 Atta cephalotes ACEP16054 N 0.000
BGLB011455 Biomphalaria glabrata BGLB011455 N 0.000
BGIBMGA003174 Bombyx mori BGIBMGA003174 N 0.000
BGIBMGA012898 Bombyx mori BGIBMGA012898 N 0.000
BGIBMGA006719 Bombyx mori BGIBMGA006719 N 0.000
TBX15 Bos taurus ENSBTAG00000007767 I 0.000
Bm3498 Brugia malayi Bm3498 I 0.000
Brh_R011566 Buceros rhinoceros Brh_R011566 N 0.000
CBG08000 Caenorhabditis briggsae CBG08000 N 0.000
Cflo_02417--XP_001121225.1_APIME Camponotus floridanus Cflo_02417--XP_001121225.1_APIME N 0.000
ENSCSAVG00000000786 Ciona savignyi ENSCSAVG00000000786 I 0.000
CGOC_0001264301 Cylicostephanus goldi CGOC_0001264301 N 0.000
KGM_15500 Danaus plexippus KGM_15500 N 0.000
YQE_10906 Dendroctonus ponderosae YQE_10906 N 0.000
YQE_06268 Dendroctonus ponderosae YQE_06268 N 0.000
ENSDORG00000012736 Dipodomys ordii ENSDORG00000012736 I 0.000
DME_0000818901 Dracunculus medinensis DME_0000818901 N 0.000
GF19461 Drosophila ananassae FBgn0096470 N 0.000
GG18707 Drosophila erecta FBgn0110916 N 0.000
GD16691 Drosophila simulans FBgn0188280 N 0.000
ECANG7_07880 Echinococcus canadensis ECANG7_07880 N 0.000
ECPE_0000395601 Echinostoma caproni ECPE_0000395601 N 0.000
EVEC_0000447801 Enterobius vermicularis EVEC_0000447801 N 0.000
GPUH_0002190501 Gongylonema pulchrum GPUH_0002190501 N 0.000
HCOI01136500 Haemonchus contortus HCOI01136500 N 0.000
HHAL010563-PA Halyomorpha halys HHAL010563-PA N 0.000
Hsal_09269--XP_394607.3_APIME Harpegnathos saltator Hsal_09269--XP_394607.3_APIME N 0.000
Hsal_04126--XP_001122560.1_APIME Harpegnathos saltator Hsal_04126--XP_001122560.1_APIME I 0.000
HMEL004264 Heliconius melpomene HMEL004264 N 0.000
ISCW019287 Ixodes scapularis ISCW019287 N 0.000
LDEC010813 Leptinotarsa decemlineata LDEC010813 N 0.000
LCUP008640 Lucilia cuprina LCUP008640 N 0.000
NECAME_11635 Necator americanus NECAME_11635 N 0.000
NECAME_19347 Necator americanus NECAME_19347 N 0.000
NBR_0002182001 Nippostrongylus brasiliensis NBR_0002182001 N 0.000
NBR_0000542501 Nippostrongylus brasiliensis NBR_0000542501 N 0.000
NBR_0001177301 Nippostrongylus brasiliensis NBR_0001177301 N 0.000
Ocbimv22013221m.g Octopus bimaculoides Ocbimv22013221m.g N 0.000
OESDEN_02780 Oesophagostomum dentatum OESDEN_02780 N 0.000
OESDEN_07954 Oesophagostomum dentatum OESDEN_07954 N 0.000
SNAPOd2T00025688001 Oikopleura dioica SNAPOd2T00025688001 N 0.000
OFLC_0001184101 Onchocerca flexuosa OFLC_0001184101 N 0.000
nOo.2.0.1.g12879 Onchocerca ochengi nOo.2.0.1.g12879 N 0.000
nOo.2.0.1.g12774 Onchocerca ochengi nOo.2.0.1.g12774 N 0.000
Ogr11253 Ophisaurus gracilis Ogr11253 N 0.000
ENSOANG00000029773 Ornithorhynchus anatinus ENSOANG00000029773 I 0.000
ENSOANG00000020395 Ornithorhynchus anatinus ENSOANG00000020395 I 0.000
PPAI007567 Phlebotomus papatasi PPAI007567 N 0.000
PPAI002123 Phlebotomus papatasi PPAI002123 N 0.000
PPA14512 Pristionchus pacificus PPA14512 N 0.000
ENSPCAG00000011680 Procavia capensis ENSPCAG00000011680 N 0.000
PXEA_0001803801 Protopolystoma xenopodis PXEA_0001803801 N 0.000
PXEA_0000704401 Protopolystoma xenopodis PXEA_0000704401 N 0.000
Smp_156650 Schistosoma mansoni Smp_156650 N 0.000
SMTD_0001100101 Schistosoma mattheei SMTD_0001100101 N 0.000
SINV17750 Solenopsis invicta SINV17750 I 0.000
SINV20004 Solenopsis invicta SINV20004 N 0.000
SPER_0003779701 Spirometra erinaceieuropaei SPER_0003779701 N 0.000
SPER_0002063901 Spirometra erinaceieuropaei SPER_0002063901 N 0.000
SPER_0003769001 Spirometra erinaceieuropaei SPER_0003769001 N 0.000
L596_g4935 Steinernema carpocapsae L596_g4935 N 0.000
L892_g20532 Steinernema scapterisci L892_g20532 N 0.000
SVUK_0001851801 Strongylus vulgaris SVUK_0001851801 N 0.000
SMUV_0000075501 Syphacia muris SMUV_0000075501 N 0.000
TELCIR_17829 Teladorsagia circumcincta TELCIR_17829 N 0.000
TRE_0001207201 Trichobilharzia regenti TRE_0001207201 N 0.000
Tal_R004166 Tyto alba Tal_R004166 N 0.000
Tal_R010698 Tyto alba Tal_R010698 N 0.000
TBX5 Vicugna pacos ENSVPAG00000009445 I 0.000
ENSXMAG00000005990 Xiphophorus maculatus ENSXMAG00000005990 N 0.000
L798_14238 Zootermopsis nevadensis L798_14238 N 0.000
L798_01365 Zootermopsis nevadensis L798_01365 N 0.000