CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
AMTR_s00095p00032720
(
Amborella trichopoda
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AMTR_s00095p00032720
T080690_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM98113
C2H2 ZF
161
185
FKCLHSGCDKTFKNPQTLKMHHKTH
ERM98113
C2H2 ZF
214
237
CRCPICGRAFVGLYELRRHFGRKH
ERM98113
C2H2 ZF
244
265
HNCKKCGKKFYIEVDLRDHEKL
ERM98113
C2H2 ZF
266
291
CGEPVECKCGMKFAFKCNLLAHKRTH
Links
Other
C2H2 ZF
family TFs
Other
Amborella trichopoda
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1325562g003
Phoenix dactylifera
PDK_20s1325562g003
N
0.782