CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZAT7
(
Arabidopsis thaliana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AT3G46090
T080857_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZAT7
M01855_2.00
Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN
PBM
Weirauch et al.(2014)
pTH7540
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT3G46070
M06813_2.00
Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD
Dap-seq
OMalley et al.(2016)
AT3G46070_col_a
0.792
0.826
AT5G03510
M00860_2.00
Arabidopsis thaliana
NNHRSWN
NWSYDNN
PBM
Franco-Zorrilla et al.(2014)
ZAT14
0.772
0.739
AT5G04390
M01857_2.00
Arabidopsis thaliana
NNHRSWN
NWSYDNN
PBM
Weirauch et al.(2014)
pTH7158
0.771
0.739
AT5G04390
M06819_2.00
Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD
Dap-seq
OMalley et al.(2016)
At5g04390_col200_a
0.771
0.739
AT3G53600
M01856_2.00
Arabidopsis thaliana
NNHASWN
NWSTDNN
PBM
Weirauch et al.(2014)
pTH7188
0.761
0.717
AT3G53600
M00858_2.00
Arabidopsis thaliana
NNNNRSWN
NWSYNNNN
PBM
Franco-Zorrilla et al.(2014)
ZAT18
0.761
0.717
For this family, TFs with SR scores >
0.755
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01855_2.00
C2H2 ZF
40
62
FRCKTCLKEFSSFQALGGHRASH
M01855_2.00
C2H2 ZF
86
108
HPCPICGVKFPMGQALGGHMRRH
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT3G46090.1
C2H2 ZF
40
62
FRCKTCLKEFSSFQALGGHRASH
AT3G46090.1
C2H2 ZF
86
108
HPCPICGVKFPMGQALGGHMRRH
Links
Other
C2H2 ZF
family TFs
Other
Arabidopsis thaliana
TFs
368 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy