Bo8g080100 (Brassica oleracea)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 Bo8g080100 T081778_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
IDD1
M06824_2.00 		Arabidopsis thaliana
DNTTTTGTCKTTTWBYD
HRVWAAAMGACAAAANH		 Dap-seq
OMalley et al.(2016)
At5g66730_colamp_a 		0.773 0.907
IDD1
M06825_2.00 		Arabidopsis thaliana
WDTTTTGTCKTTTWNYD
HRNWAAAMGACAAAAHW		 Dap-seq
OMalley et al.(2016)
At5g66730_col 		0.773 0.907
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo8g080100.1 C2H2 ZF 138 159
Bo8g080100.1 C2H2 ZF 158 184

Links

Other C2H2 ZF family TFs
Other Brassica oleracea TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bra036098 Brassica rapa Bra036098 I 0.827
Thhalv10010353m.g Eutrema salsugineum Thhalv10010353m.g I 0.807
GSMUA_Achr8G10040_001 Musa acuminata GSMUA_Achr8G10040_001 I 0.797
Traes_2AL_7ABA7B7C8 Triticum aestivum Traes_2AL_7ABA7B7C8 I 0.778
Traes_2BL_58A855C7B Triticum aestivum Traes_2BL_58A855C7B I 0.778
Traes_2DL_540050272 Triticum aestivum Traes_2DL_540050272 I 0.778
Si009633m.g Setaria italica Si009633m.g I 0.778
Si001504m.g Setaria italica Si001504m.g I 0.778
TCM_000429 Theobroma cacao TCM_000429 I 0.778
TRAES3BF042100060CFD_g Triticum aestivum TRAES3BF042100060CFD_g I 0.778
VIT_04s0023g01430 Vitis vinifera VIT_04s0023g01430 I 0.778
TRIUR3_35215 Triticum urartu TRIUR3_35215 I 0.778
Traes_6DL_244C908B5 Triticum aestivum Traes_6DL_244C908B5 I 0.778
Si001287m.g Setaria italica Si001287m.g I 0.778
Traes_3AL_35CA14632 Triticum aestivum Traes_3AL_35CA14632 I 0.778
Sb03g025790 Sorghum bicolor Sb03g025790 I 0.778
ORUFI04G23520 Oryza rufipogon ORUFI04G23520 I 0.778
OS01G0572300 Oryza sativa OS01G0572300 I 0.778
ORUFI02G28900 Oryza rufipogon ORUFI02G28900 I 0.778
ORUFI01G22710 Oryza rufipogon ORUFI01G22710 I 0.778
ORGLA02G0236400 Oryza glaberrima ORGLA02G0236400 I 0.778
OS02G0672100 Oryza sativa OS02G0672100 I 0.778
OS04G0566400 Oryza sativa OS04G0566400 I 0.778
Ca_03678 Cicer arietinum Ca_03678 I 0.778
PRUPE_ppa004299mg Prunus persica PRUPE_ppa004299mg I 0.778
XM_002310763.1 Populus trichocarpa POPTR_0007s12520 I 0.778
POPTR_0005s12710 Populus trichocarpa POPTR_0005s12710 I 0.778
Sb06g025550 Sorghum bicolor Sb06g025550 I 0.778
Cla015825 Citrullus lanatus Cla015825 I 0.778
Gorai.007G205300 Gossypium raimondii Gorai.007G205300 I 0.778
Lus10041723.g Linum usitatissimum Lus10041723.g I 0.778
Gorai.003G016300 Gossypium raimondii Gorai.003G016300 I 0.778
Gorai.003G016200 Gossypium raimondii Gorai.003G016200 I 0.778
gene29562-v1.0-hybrid Fragaria vesca gene29562-v1.0-hybrid I 0.778
MDP0000137126 Malus domestica MDP0000137126 I 0.778
Pavir.Ga01013 Panicum virgatum Pavir.Ga01013 I 0.778
SapurV1A.3093s0010 Salix purpurea SapurV1A.3093s0010 I 0.778
PK02322.1 Cannabis sativa PK02322.1 I 0.778
SapurV1A.0817s0050 Salix purpurea SapurV1A.0817s0050 I 0.778
SapurV1A.0255s0120 Salix purpurea SapurV1A.0255s0120 I 0.778
Pavir.Gb01057 Panicum virgatum Pavir.Gb01057 I 0.778
evm.TU.supercontig_158.1 Carica papaya evm.TU.supercontig_158.1 I 0.778
Eucgr.I02463 Eucalyptus grandis Eucgr.I02463 I 0.778
cassava42858.valid.m1 Manihot esculenta cassava42858.valid.m1 I 0.778
Cucsa.163800 Cucumis sativus Cucsa.163800 I 0.778
cassava29681.valid.m1 Manihot esculenta cassava29681.valid.m1 I 0.778
Pm026593 Prunus mume Pm026593 I 0.778
OPUNC04G19640 Oryza punctata OPUNC04G19640 I 0.778
Cucsa.190800 Cucumis sativus Cucsa.190800 I 0.778
mgf003280m Mimulus guttatus mgf003280m I 0.778
Carubv10017209m.g Capsella rubella Carubv10017209m.g I 0.778
Cagra.0926s0031 Capsella grandiflora Cagra.0926s0031 I 0.778
Bostr.6864s0177 Boechera stricta Bostr.6864s0177 I 0.778
mgf006239m Mimulus guttatus mgf006239m I 0.778
Cla014416 Citrullus lanatus Cla014416 I 0.778
PGSC0003DMG400012684 Solanum tuberosum PGSC0003DMG400012684 I 0.778
GSMUA_Achr10G07180_001 Musa acuminata GSMUA_Achr10G07180_001 I 0.778
GSMUA_Achr10G21260_001 Musa acuminata GSMUA_Achr10G21260_001 I 0.778
GRMZM5G884137 Zea mays GRMZM5G884137 I 0.778
GRMZM2G177693 Zea mays GRMZM2G177693 I 0.778
GRMZM2G129261 Zea mays GRMZM2G129261 I 0.778
GSMUA_Achr11G07460_001 Musa acuminata GSMUA_Achr11G07460_001 I 0.778
GSMUA_Achr1G02080_001 Musa acuminata GSMUA_Achr1G02080_001 I 0.778
LPERR01G17290 Leersia perrieri LPERR01G17290 I 0.778
GSMUA_Achr5G06450_001 Musa acuminata GSMUA_Achr5G06450_001 I 0.778
GSMUA_Achr4G04310_001 Musa acuminata GSMUA_Achr4G04310_001 I 0.778
OPUNC03G06880 Oryza punctata OPUNC03G06880 I 0.778
GRMZM2G027333 Zea mays GRMZM2G027333 I 0.778
GLYMA20G37900 Glycine max GLYMA20G37900 I 0.778
BRADI2G41550 Brachypodium distachyon BRADI2G41550 I 0.778
Bo3g129830 Brassica oleracea Bo3g129830 I 0.778
BGIOSGA016934 Oryza indica BGIOSGA016934 I 0.778
BGIOSGA008789 Oryza indica BGIOSGA008789 I 0.778
BRADI5G18530 Brachypodium distachyon BRADI5G18530 I 0.778
F775_28900 Aegilops tauschii F775_28900 I 0.778
GLYMA17G34601 Glycine max GLYMA17G34601 I 0.778
GLYMA10G29390 Glycine max GLYMA10G29390 I 0.778
GLYMA01G38290 Glycine max GLYMA01G38290 I 0.778
AtIDD2 Arabidopsis lyrata fgenesh2_kg.5__1410__AT3G50700.1 I 0.778
LPERR02G22320 Leersia perrieri LPERR02G22320 I 0.778
GSMUA_Achr1G07110_001 Musa acuminata GSMUA_Achr1G07110_001 I 0.778
OB02G34800 Oryza brachyantha OB02G34800 I 0.778
OMERI01G18610 Oryza meridionalis OMERI01G18610 I 0.778
ONIVA01G22710 Oryza nivara ONIVA01G22710 I 0.778
OBART01G20150 Oryza barthii OBART01G20150 I 0.778
OBART04G21910 Oryza barthii OBART04G21910 I 0.778
OGLUM04G21940 Oryza glumaepatula OGLUM04G21940 I 0.778
OGLUM02G28000 Oryza glumaepatula OGLUM02G28000 I 0.778
OGLUM01G23770 Oryza glumaepatula OGLUM01G23770 I 0.778
ONIVA02G30280 Oryza nivara ONIVA02G30280 I 0.778
OMERI02G26740 Oryza meridionalis OMERI02G26740 I 0.778
OPUNC02G25110 Oryza punctata OPUNC02G25110 I 0.778
MLOC_56120 Hordeum vulgare MLOC_56120 I 0.778
MLOC_57518 Hordeum vulgare MLOC_57518 I 0.778
ONIVA04G20460 Oryza nivara ONIVA04G20460 I 0.778
OPUNC01G20510 Oryza punctata OPUNC01G20510 I 0.778
PK15161.1 Cannabis sativa PK15161.1 I 0.773
gene02702-v1.0-hybrid Fragaria vesca gene02702-v1.0-hybrid I 0.773
Eucgr.J02851 Eucalyptus grandis Eucgr.J02851 I 0.773
GLYMA03G39650 Glycine max GLYMA03G39650 I 0.773
IDD1 Arabidopsis thaliana AT5G66730 D 0.773
fgenesh2_kg.8__2743__AT5G66730.1 Arabidopsis lyrata fgenesh2_kg.8__2743__AT5G66730.1 I 0.773
GLYMA19G42280 Glycine max GLYMA19G42280 I 0.773
BRADI3G51090 Brachypodium distachyon BRADI3G51090 I 0.773
Bra037151 Brassica rapa Bra037151 I 0.773
Gorai.010G099600 Gossypium raimondii Gorai.010G099600 I 0.773
SapurV1A.0086s0480 Salix purpurea SapurV1A.0086s0480 I 0.773
Thhalv10004063m.g Eutrema salsugineum Thhalv10004063m.g I 0.773
PGSC0003DMG400008205 Solanum tuberosum PGSC0003DMG400008205 I 0.773
POPTR_0006s24410 Populus trichocarpa POPTR_0006s24410 I 0.773
Pm005517 Prunus mume Pm005517 I 0.773
Solyc08g063040.2 Solanum lycopersicum Solyc08g063040.2 I 0.773
Eucgr.B02626 Eucalyptus grandis Eucgr.B02626 I 0.773
Cla014763 Citrullus lanatus Cla014763 I 0.773
TCM_037300 Theobroma cacao TCM_037300 I 0.773
GSMUA_Achr7G13540_001 Musa acuminata GSMUA_Achr7G13540_001 I 0.773
GSMUA_Achr5G22140_001 Musa acuminata GSMUA_Achr5G22140_001 I 0.773
VIT_04s0008g01160 Vitis vinifera VIT_04s0008g01160 I 0.773
MLOC_60958 Hordeum vulgare MLOC_60958 I 0.773
29794.m003304 Ricinus communis 29794.m003304 I 0.773
Cagra.2007s0026 Capsella grandiflora Cagra.2007s0026 I 0.773
LPERR04G17920 Leersia perrieri LPERR04G17920 I 0.773
Carubv10026275m.g Capsella rubella Carubv10026275m.g I 0.773
MTR_1g016010 Medicago truncatula MTR_1g016010 I 0.773
Bostr.0568s0090 Boechera stricta Bostr.0568s0090 I 0.773
PRUPE_ppa004359mg Prunus persica PRUPE_ppa004359mg I 0.773
Cucsa.201280 Cucumis sativus Cucsa.201280 I 0.773
GSMUA_AchrUn_randomG09270_001 Musa acuminata GSMUA_AchrUn_randomG09270_001 I 0.772
Ciclev10007837m.g Citrus clementina Ciclev10007837m.g I 0.772
orange1.1g008017m.g Citrus sinensis orange1.1g008017m.g I 0.772
GSMUA_Achr4G07200_001 Musa acuminata GSMUA_Achr4G07200_001 I 0.768
GSMUA_Achr2G16690_001 Musa acuminata GSMUA_Achr2G16690_001 I 0.767