CBG12499 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG12499 T082919_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ces-1
M00608_2.00 		Caenorhabditis elegans
CCTGTTG
CAACAGG		 PBM
Narasimhan et al.(2015)
pTH9158 		0.771 0.982
ces-1
M09518_2.00 		Caenorhabditis elegans
NWAATYNRATTW
WAATYNRATTWN		 Misc
Heinz et al.(2010)
cElegans-L1-CES1_modEncode 		0.771 0.982
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG12499 C2H2 ZF 142 164
CBG12499 C2H2 ZF 173 195
CBG12499 C2H2 ZF 199 221
CBG12499 C2H2 ZF 227 249
CBG12499 C2H2 ZF 255 276

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DICVIV_09749 Dictyocaulus viviparus DICVIV_09749 N 0.792
HCOI01424900 Haemonchus contortus HCOI01424900 N 0.789
ACOC_0000728001 Angiostrongylus costaricensis ACOC_0000728001 N 0.779
ces-1 Caenorhabditis elegans WBGene00000468 D 0.771
CRE29493 Caenorhabditis remanei CRE29493 I 0.762
CBN22561 Caenorhabditis brenneri CBN22561 I 0.762