CBN08888 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN08888 T083004_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-6
M00631_2.00 		Caenorhabditis elegans
NNDCTDDAAN
NTTHHAGHNN		 PBM
Narasimhan et al.(2015)
pTH9958 		0.811 0.971
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN08888 C2H2 ZF 333 357
CBN08888 C2H2 ZF 362 384
CBN08888 C2H2 ZF 390 411

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

6 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CRE13917 Caenorhabditis remanei CRE13917 I 0.827
CBG07957 Caenorhabditis briggsae CBG07957 I 0.827
CJA15462 Caenorhabditis japonica CJA15462 I 0.827
CBN11039 Caenorhabditis brenneri CBN11039 I 0.827
CJA37014 Caenorhabditis japonica CJA37014 I 0.821
ztf-6 Caenorhabditis elegans WBGene00012317 D 0.811