CBN12312 (Caenorhabditis brenneri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBN12312 T083016_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
klu-1
M00637_2.00 		Caenorhabditis elegans
CDCCCMCV
BGKGGGHG		 PBM
Narasimhan et al.(2015)
pTH9355 		0.824 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN12312 C2H2 ZF 311 334
CBN12312 C2H2 ZF 348 370
CBN12312 C2H2 ZF 376 398
CBN12312 C2H2 ZF 404 426

Links

Other C2H2 ZF family TFs
Other Caenorhabditis brenneri TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN30915 Caenorhabditis brenneri CBN30915 I 0.827
klu-1 Caenorhabditis elegans WBGene00013970 D 0.824
CRE13956 Caenorhabditis remanei CRE13956 I 0.824
CBG19812 Caenorhabditis briggsae CBG19812 I 0.821
CJA16091 Caenorhabditis japonica CJA16091 I 0.815
ANCCAN_10701 Ancylostoma caninum ANCCAN_10701 I 0.778
CGOC_0000202301 Cylicostephanus goldi CGOC_0000202301 I 0.778
HCOI02146900 Haemonchus contortus HCOI02146900 I 0.776
BXY_0483000 Bursaphelenchus xylophilus BXY_0483000 I 0.773
nDi.2.2.2.g07689 Dirofilaria immitis nDi.2.2.2.g07689 I 0.764
Bm9026 Brugia malayi Bm9026 I 0.764
nAv.1.0.1.g02699 Acanthocheilonema viteae nAv.1.0.1.g02699 I 0.764
EEL_0000130601 Elaeophora elaphi EEL_0000130601 I 0.764
WBGene00248644 Onchocerca volvulus WBGene00248644 I 0.764
LOAG_17546 Loa loa LOAG_17546 I 0.764
nLs.2.1.2.g02913 Litomosoides sigmodontis nLs.2.1.2.g02913 I 0.761
MhA1_Contig3096.frz3.gene1 Meloidogyne hapla MhA1_Contig3096.frz3.gene1 I 0.761
MhA1_Contig1668.frz3.gene4 Meloidogyne hapla MhA1_Contig1668.frz3.gene4 I 0.761
ASU_11043 Ascaris suum ASU_11043 I 0.761
L892_g30369 Steinernema scapterisci L892_g30369 I 0.761
L596_g19227 Steinernema carpocapsae L596_g19227 I 0.761
L898_g5287 Steinernema monticolum L898_g5287 I 0.761
GPLIN_001505900 Globodera pallida GPLIN_001505900 I 0.757
SVE_1611300 Strongyloides venezuelensis SVE_1611300 I 0.756
SPAL_0000289400 Strongyloides papillosus SPAL_0000289400 I 0.756