CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CERSUDRAFT_123724
(
Ceriporiopsis subvermispora
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CERSUDRAFT_123724
T083247_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SCHCODRAFT_110420
M01458_2.00
Schizophyllum commune
VCGCCACNNN
NNNGTGGCGB
PBM
Najafabadi et al.(2015a)
pTH10238
0.787
0.844
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMD37900
C2H2 ZF
184
206
FSCDMCALSFNRQHDLKRHRDTH
EMD37900
C2H2 ZF
212
234
FLCNGGCGKTFTRKDALKRHQLV
Links
Other
C2H2 ZF
family TFs
Other
Ceriporiopsis subvermispora
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy