CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CH063_01293
(
Colletotrichum higginsianum
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CH063_01293
T083645_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06907
M01889_2.00
Neurospora crassa
YYMGCCHCNN
NNGDGGCKRR
PBM
Weirauch et al.(2014)
pTH9682
0.785
0.896
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCF35354
C2H2 ZF
205
229
WTCVYEDCGKKFGRKENIKSHVQTH
CCF35354
C2H2 ZF
235
257
YQCPTCKKCFVRQHDLKRHAKIH
CCF35354
C2H2 ZF
263
283
YPCECGNSFARHDALTRHRQR
Links
Other
C2H2 ZF
family TFs
Other
Colletotrichum higginsianum
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy