CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CMQ_5444
(
Grosmannia clavigera
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CMQ_5444
T083869_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03975
M01879_2.00
Neurospora crassa
NNRCWYDDNN
NNHHRWGYNN
PBM
Weirauch et al.(2014)
pTH9677
0.815
0.957
HCBG_04116
M01448_2.00
Histoplasma capsulatum
RHCHGWGCDB
VHGCWCDGDY
PBM
Najafabadi et al.(2015a)
pTH11149
0.798
0.935
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX03394
C2H2 ZF
100
122
YPCSTCGKGFARRSDLARHERIH
EFX03394
C2H2 ZF
128
152
HVCDYPGCGKQFIQRSALTVHRRVH
EFX03394
C2H2 ZF
158
180
HQCERCGKPFSDSSSLARHRRIH
EFX03394
C2H2 ZF
186
210
YKCPYADCQKTFTRRTTLTRHQNHH
Links
Other
C2H2 ZF
family TFs
Other
Grosmannia clavigera
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy