CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE00458
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE00458
T084956_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lsy-2
M00615_2.00
Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN
PBM
Narasimhan et al.(2015)
pTH10810
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE00458
C2H2 ZF
71
93
HQCNVCNKIFVSYKGLQQHAVIH
CRE00458
C2H2 ZF
99
121
FRCDICSKSFRFKSNLFEHRSVH
CRE00458
C2H2 ZF
127
149
HACPYCGKTCRLKGNLKKHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy