CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE13956
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE13956
T085001_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
klu-1
M00637_2.00
Caenorhabditis elegans
CDCCCMCV
BGKGGGHG
PBM
Narasimhan et al.(2015)
pTH9355
0.821
0.978
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE13956
C2H2 ZF
326
349
YPCTMCGQAFAVHDRLAKHIASRH
CRE13956
C2H2 ZF
363
385
HKCNMCSKSFSRSDMLTRHMRLH
CRE13956
C2H2 ZF
391
413
YSCPTCNQVFSRSDHLSTHLRTH
CRE13956
C2H2 ZF
419
441
YACPLCNYSASRRDMISRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy