CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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REST
(
Anolis carolinensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSACAG00000002355
T085864_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
REST
M08084_2.00
Homo sapiens
GSHGCTGTCCRWGGTSCTGAH
DTCAGSACCWYGGACAGCDSC
ChIP-seq
Mathelier et al.(2014)
MA0138.2
0.786
0.894
REST
M07846_2.00
Homo sapiens
TCCVHGGTGCTGAM
KTCAGCACCDBGGA
ChIP-seq
Gerstein et al.(2012)
GM12878_NRSF_HudsonAlpha
0.786
0.894
REST
M07847_2.00
Homo sapiens
GCTGTCCRHGGTGCT
AGCACCDYGGACAGC
ChIP-seq
Gerstein et al.(2012)
H1-hESC_NRSF_HudsonAlpha
0.786
0.894
REST
M07848_2.00
Homo sapiens
HGCTGTCCRWGGTSCT
AGSACCWYGGACAGCD
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_NRSF_HudsonAlpha
0.786
0.894
REST
M07849_2.00
Homo sapiens
TGTCCRHGGTGCTGA
TCAGCACCDYGGACA
ChIP-seq
Gerstein et al.(2012)
HepG2_NRSF_HudsonAlpha
0.786
0.894
REST
M07850_2.00
Homo sapiens
TGTCCVHGGTGCTGA
TCAGCACCDBGGACA
ChIP-seq
Gerstein et al.(2012)
HTB-11_NRSF_HudsonAlpha
0.786
0.894
REST
M07851_2.00
Homo sapiens
CTGTCCVHGGTGCTGA
TCAGCACCDBGGACAG
ChIP-seq
Gerstein et al.(2012)
K562_NRSF_HudsonAlpha
0.786
0.894
REST
M07852_2.00
Homo sapiens
GSHGCTGTCCRHGGTGCTGAM
KTCAGCACCDYGGACAGCDSC
ChIP-seq
Gerstein et al.(2012)
PANC-1_NRSF_HudsonAlpha
0.786
0.894
REST
M07853_2.00
Homo sapiens
CTGTCCRHGGTGCTG
CAGCACCDYGGACAG
ChIP-seq
Gerstein et al.(2012)
PFSK-1_NRSF_HudsonAlpha
0.786
0.894
REST
M07854_2.00
Homo sapiens
GSHGCTGTCCRHGGT
ACCDYGGACAGCDSC
ChIP-seq
Gerstein et al.(2012)
U87_NRSF_HudsonAlpha
0.786
0.894
REST
M08861_2.00
Homo sapiens
DGSHGCTGTCCRHGGTGCTGAH
DTCAGCACCDYGGACAGCDSCH
Misc
Kulakovskiy et al.(2013)
REST_HUMAN.H11MO.0.A
0.786
0.894
REST
M09501_2.00
Homo sapiens
GGHGCTGTCCRWGGTGCTGA
TCAGCACCWYGGACAGCDCC
Misc
Heinz et al.(2010)
Jurkat-NRSF
0.786
0.894
REST
M10116_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRSE_B
0.786
0.894
REST
M10117_2.00
Homo sapiens
GSYKCTGTCCGYGGTGCTGAA
TTCAGCACCRCGGACAGMRSC
Transfac
Matys et al.(2006)
V$NRSF_01
0.786
0.894
REST
M10118_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_01
0.786
0.894
REST
M10119_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_04
0.786
0.894
REST
M10120_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_05
0.786
0.894
REST
M10121_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_06
0.786
0.894
REST
M10122_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_10
0.786
0.894
REST
M10123_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_12
0.786
0.894
REST
M10124_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$REST_Q5
0.786
0.894
Rest
M08983_2.00
Mus musculus
DGBHGCTGTCCDHGGTSCTGRH
DYCAGSACCDHGGACAGCDVCH
Misc
Kulakovskiy et al.(2013)
REST_MOUSE.H11MO.0.A
0.786
0.888
Rest
M10362_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NRSF_Q4
0.786
0.888
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSACAP00000002252
C2H2 ZF
128
150
IRCDRCGYNTNRYDHYLAHLKHH
ENSACAP00000002252
C2H2 ZF
160
182
YKCTICTYTTISEYHWKKHLRNH
ENSACAP00000002252
C2H2 ZF
188
210
YTCLQCSYFSDRKNNYVQHIRTH
ENSACAP00000002252
C2H2 ZF
216
238
YQCTMCPYSSSQKTHLTRHMRTH
ENSACAP00000002252
C2H2 ZF
244
267
FKCEQCSYVASNQHEVTRHARQVH
ENSACAP00000002252
C2H2 ZF
273
295
LVCPHCEYKTADRSNFKKHVELH
ENSACAP00000002252
C2H2 ZF
301
324
FLCPVCEYAASKKCNLQYHIKSRH
ENSACAP00000019511
C2H2 ZF
217
239
IRCDRCGYNTNRYDHYLAHLKHH
ENSACAP00000019511
C2H2 ZF
249
271
YKCTICTYTTISEYHWKKHLRNH
ENSACAP00000019511
C2H2 ZF
277
299
YTCLQCSYFSDRKNNYVQHIRTH
ENSACAP00000019511
C2H2 ZF
305
327
YQCTMCPYSSSQKTHLTRHMRTH
ENSACAP00000019511
C2H2 ZF
333
356
FKCEQCSYVASNQHEVTRHARQVH
ENSACAP00000019511
C2H2 ZF
362
384
LVCPHCEYKTADRSNFKKHVELH
ENSACAP00000019511
C2H2 ZF
390
413
FLCPVCEYAASKKCNLQYHIKSRH
Links
Other
C2H2 ZF
family TFs
Other
Anolis carolinensis
TFs
58 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy