CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMXG00000014229
(
Astyanax mexicanus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAMXG00000014229
T087286_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF384
M04451_2.00
Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA
SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX
0.756
0.853
ZNF384
M08306_2.00
Homo sapiens
CTTTTTTTT
AAAAAAAAG
ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE
0.756
0.853
ZNF384
M08090_2.00
Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW
ChIP-seq
Mathelier et al.(2014)
MA1125.1
0.756
0.853
ZNF384
M08888_2.00
Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV
Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C
0.756
0.853
ZNF384
M10209_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CIZ_01
0.756
0.853
ZNF384
M04452_2.00
Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM
SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX
0.756
0.853
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMXP00000014636
C2H2 ZF
249
271
YRCRMCAVTFFSKSDMQIHAKSH
ENSAMXP00000014636
C2H2 ZF
277
299
HKCPHCSKSFANSSYLSQHIRIH
ENSAMXP00000014636
C2H2 ZF
305
327
YTCSYCQKSFRQLSHLQQHTRNH
ENSAMXP00000014636
C2H2 ZF
333
355
HKCPHCSKSFANSSYLSQHIRIH
ENSAMXP00000014636
C2H2 ZF
361
383
YTCSYCQKTFRQLSHLQQHHRIH
ENSAMXP00000014636
C2H2 ZF
389
413
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSAMXP00000014636
C2H2 ZF
419
441
YKCHNCNRGYTDAASLEVHLSTH
ENSAMXP00000014636
C2H2 ZF
449
471
YSCGLCNRSYTSETYLMKHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Astyanax mexicanus
TFs
39 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy