ENSCING00000006616 (Ciona intestinalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCING00000006616 T089078_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Osr2
M00132_2.00
Mus musculus
NGCTWCYGNN

NNCRGWAGCN
PBM
Badis et al.(2009)
Osr2_1727
0.804 0.942
Osr1
M00144_2.00
Mus musculus
NVCTHCYNN

NNRGDAGBN
PBM
Badis et al.(2009)
Osr1_3033
0.788 0.928
Osr1
M01174_2.00
Mus musculus
GCTACYGT

ACRGTAGC
PBM
Lambert et al.(2019)
pTH5339
0.788 0.928
OSR1
M04477_2.00
Homo sapiens
NGCTACYGTD

HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_HT-SELEX
0.788 0.928
OSR1
M04478_2.00
Homo sapiens
NGCTACYGTD

HACRGTAGCN
SELEX
Yin et al.(2017)
OSR1_eDBD_Methyl-HT-SELEX
0.788 0.928
odd-2
M00618_2.00
Caenorhabditis elegans
NGCTACYGK

MCRGTAGCN
PBM
Narasimhan et al.(2015)
pTH9150
0.774 0.841
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000013586 C2H2 ZF 29 51
ENSCINP00000013586 C2H2 ZF 57 79
ENSCINP00000013586 C2H2 ZF 85 107

Links

Other C2H2 ZF family TFs
Other Ciona intestinalis TFs

Invalid Input OrderBy

136 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action