ENSCPOG00000012706 (Cavia porcellus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCPOG00000012706 T089957_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI3
M04607_2.00 		Homo sapiens
YRCACCTGYH
DRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX 		0.773 0.850
SNAI3
M04608_2.00 		Homo sapiens
YVCACCTGYH
DRCAGGTGBR		 SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX 		0.773 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000011431 C2H2 ZF 141 165
ENSCPOP00000011431 C2H2 ZF 172 194
ENSCPOP00000011431 C2H2 ZF 197 213
ENSCPOP00000011431 C2H2 ZF 219 241
ENSCPOP00000011431 C2H2 ZF 247 267

Links

Other C2H2 ZF family TFs
Other Cavia porcellus TFs

Invalid Input OrderBy

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action