CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRDM5
(
Cavia porcellus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCPOG00000012883
T089960_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCPOP00000011596
C2H2 ZF
137
160
YACPQCESSFPSEEILAEHLQTLH
ENSCPOP00000011596
C2H2 ZF
169
189
FKCKNCGKKFPVKQALQRHGL
ENSCPOP00000011596
C2H2 ZF
204
225
FQCSFCNSSFSSALSFEQHQET
ENSCPOP00000011596
C2H2 ZF
232
257
FVCKADSCGKRLKSKDALKRHQENVH
ENSCPOP00000011596
C2H2 ZF
265
287
LICSVCNKKCSSPSSLQQHRKIH
ENSCPOP00000011596
C2H2 ZF
290
312
FDCQECMKKFISANQLKRHMITH
ENSCPOP00000011596
C2H2 ZF
318
340
YKCEICNKSFKRLDQVGAHKVIH
ENSCPOP00000011596
C2H2 ZF
346
368
YKCKLCGKGFAHRNVYKNHKKTH
ENSCPOP00000011596
C2H2 ZF
374
396
FQCGECKALFRTPFSLQRHLLIH
ENSCPOP00000011596
C2H2 ZF
402
425
FKCHHCDATFKRKDTLNVHVQVVH
ENSCPOP00000011596
C2H2 ZF
431
453
YRCELCNKAFVTPSVLRSHKKTH
ENSCPOP00000011596
C2H2 ZF
459
481
KVCPYCGQKFASSGTLRVHIRSH
ENSCPOP00000011596
C2H2 ZF
487
509
YQCPYCEKGFSKNDGLKMHIRTH
ENSCPOP00000019387
C2H2 ZF
137
160
YACPQCESSFPSEEILAEHLQTLH
ENSCPOP00000019387
C2H2 ZF
169
191
FKCKNCGKKFPVKQALQRHFEQH
ENSCPOP00000019387
C2H2 ZF
201
226
FVCKADSCGKRLKSKDALKRHQENVH
ENSCPOP00000019387
C2H2 ZF
234
256
LICSVCNKKCSSPSSLQQHRKIH
ENSCPOP00000019387
C2H2 ZF
259
281
FDCQECMKKFISANQLKRHMITH
ENSCPOP00000019387
C2H2 ZF
287
309
YKCEICNKSFKRLDQVGAHKVIH
ENSCPOP00000019387
C2H2 ZF
315
337
YKCKLCGKGFAHRNVYKNHKKTH
ENSCPOP00000019387
C2H2 ZF
343
365
FQCGECKALFRTPFSLQRHLLIH
ENSCPOP00000019387
C2H2 ZF
371
394
FKCHHCDATFKRKDTLNVHVQVVH
ENSCPOP00000019387
C2H2 ZF
400
422
YRCELCNKAFVTPSVLRSHKKTH
ENSCPOP00000019387
C2H2 ZF
428
450
KVCPYCGQKFASSGTLRVHIRSH
ENSCPOP00000019387
C2H2 ZF
456
478
YQCPYCEKGFSKNDGLKMHIRTH
Links
Other
C2H2 ZF
family TFs
Other
Cavia porcellus
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PRDM5
Pan troglodytes
ENSPTRG00000016403
N
0.766
ENSP00000264808-D1
Bos grunniens
ENSP00000264808-D1
N
0.761