CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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zbtb7b
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000021891
T090861_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Zbtb7b
M00135_2.00
Mus musculus
NKMCCCCNNN
NNNGGGGKMN
PBM
Badis et al.(2009)
Zbtb7b_1054
0.774
0.848
ZBTB7B
M02895_2.00
Homo sapiens
DCGACCMCCVAN
NTBGGKGGTCGH
SELEX
Jolma et al.(2013)
ZBTB7B_1
0.774
0.848
ZBTB7B
M04497_2.00
Homo sapiens
DCGACCACCN
NGGTGGTCGH
SELEX
Yin et al.(2017)
ZBTB7B_eDBD_HT-SELEX
0.774
0.848
ZBTB7B
M10233_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CKROX_Q2
0.774
0.848
ZBTB7B
M04498_2.00
Homo sapiens
DCGMCCACCN
NGGTGGKCGH
SELEX
Yin et al.(2017)
ZBTB7B_eDBD_Methyl-HT-SELEX
0.774
0.848
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000031455
C2H2 ZF
260
282
QQCPVCQKIIHGAGKLPRHMRTH
ENSDARP00000031455
C2H2 ZF
288
310
FQCTACGVRFTRNDKLKIHMRKH
ENSDARP00000031455
C2H2 ZF
316
338
YPCPSCPARFLHSYDLKNHLSLH
ENSDARP00000031455
C2H2 ZF
344
366
FECPLCHKAFAREDHLQRHRKGH
ENSDARP00000139608
C2H2 ZF
144
166
QQCPVCQKIIHGAGKLPRHMRTH
ENSDARP00000139608
C2H2 ZF
172
194
FQCTACGVRFTRNDKLKIHMRKH
ENSDARP00000139608
C2H2 ZF
200
222
YPCPSCPARFLHSYDLKNHLSLH
ENSDARP00000139608
C2H2 ZF
228
250
FECPLCHKAFAREDHLQRHRKGH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy