CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf408
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000036043
T090890_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000052328
C2H2 ZF
322
344
YKCEECDKSFFQLCHLKKHKYTH
ENSDARP00000052328
C2H2 ZF
350
372
YTCTECGKSYSSHESFQAHLLMH
ENSDARP00000052328
C2H2 ZF
378
400
FKCEQCDKSYGLKRDLKEHQVLH
ENSDARP00000052328
C2H2 ZF
406
428
FVCDICGKAFARRPSLRVHREIH
ENSDARP00000052328
C2H2 ZF
440
462
VKCPECDKELANSGSLRNHMRLH
ENSDARP00000052328
C2H2 ZF
468
490
HICPHCNKCFRQRGNLQGHMRIH
ENSDARP00000052328
C2H2 ZF
496
518
YRCDHCDLRFSQVPELRRHLISH
ENSDARP00000052328
C2H2 ZF
523
545
YLCPVCGKALRDPHTLRAHERLH
ENSDARP00000052328
C2H2 ZF
551
573
YKCEQCGKGYTMATKLRRHLKSH
ENSDARP00000052328
C2H2 ZF
579
601
HVCQVCGAKYSMMQSLQRHLQLH
ENSDARP00000134656
C2H2 ZF
297
319
YKCEECDKSFFQLCHLKKHKYTH
ENSDARP00000134656
C2H2 ZF
325
347
YTCTECGKSYSSHESFQAHLLMH
ENSDARP00000134656
C2H2 ZF
353
375
FKCEQCDKSYGLKRDLKEHQVLH
ENSDARP00000134656
C2H2 ZF
381
403
FVCDICGKAFARRPSLRVHREIH
ENSDARP00000134656
C2H2 ZF
415
437
VKCPECDKELANSGSLRNHMRLH
ENSDARP00000134656
C2H2 ZF
443
465
HICPHCNKCFRQRGNLQGHMRIH
ENSDARP00000134656
C2H2 ZF
471
493
YRCDHCDLRFSQVPELRRHLISH
ENSDARP00000134656
C2H2 ZF
498
520
YLCPVCGKALRDPHTLRAHERLH
ENSDARP00000134656
C2H2 ZF
526
548
YKCEQCGKGYTMATKLRRHLKSH
ENSDARP00000134656
C2H2 ZF
554
576
HVCQVCGAKYSMMQSLQRHLQLH
ENSDARP00000134713
C2H2 ZF
283
305
YKCEECDKSFFQLCHLKKHKYTH
ENSDARP00000134713
C2H2 ZF
311
333
YTCTECGKSYSSHESFQAHLLMH
ENSDARP00000134713
C2H2 ZF
339
361
FKCEQCDKSYGLKRDLKEHQVLH
ENSDARP00000134713
C2H2 ZF
367
389
FVCDICGKAFARRPSLRVHREIH
ENSDARP00000134713
C2H2 ZF
401
423
VKCPECDKELANSGSLRNHMRLH
ENSDARP00000134713
C2H2 ZF
429
451
HICPHCNKCFRQRGNLQGHMRIH
ENSDARP00000134713
C2H2 ZF
457
479
YRCDHCDLRFSQVPELRRHLISH
ENSDARP00000134713
C2H2 ZF
484
506
YLCPVCGKALRDPHTLRAHERLH
ENSDARP00000134713
C2H2 ZF
512
534
YKCEQCGKGYTMATKLRRHLKSH
ENSDARP00000134713
C2H2 ZF
540
562
HVCQVCGAKYSMMQSLQRHLQLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action