bcl6ab (Danio rerio)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDARG00000069295 T091002_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription repressor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in negative regulation of transcription by RNA polymerase II; regulation of cytokine production; and regulation of immune system process. Predicted to be active in nucleoplasm. Human ortholog(s) of this gene implicated in B-cell lymphoma and diffuse large B-cell lymphoma. Orthologous to human BCL6 (BCL6 transcription repressor). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000116903 C2H2 ZF 438 460
ENSDARP00000116903 C2H2 ZF 466 488
ENSDARP00000116903 C2H2 ZF 494 516
ENSDARP00000116903 C2H2 ZF 522 545

Links

Other C2H2 ZF family TFs
Other Danio rerio TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSPANG00000017677 Papio anubis ENSPANG00000017677 I 0.818
BCL6 Homo sapiens ENSG00000113916 D 0.818
BCL6 Callithrix jacchus ENSCJAG00000014375 I 0.818
ENSAMXG00000018736 Astyanax mexicanus ENSAMXG00000018736 N 0.809
bcl6b Takifugu rubripes ENSTRUG00000013220 N 0.792
ENSPFOG00000009503 Poecilia formosa ENSPFOG00000009503 N 0.792
bcl6b Tetraodon nigroviridis ENSTNIG00000002560 N 0.792
ENSONIG00000004819 Oreochromis niloticus ENSONIG00000004819 N 0.792
ENSGMOG00000013899 Gadus morhua ENSGMOG00000013899 N 0.792
ENSAMXG00000012978 Astyanax mexicanus ENSAMXG00000012978 N 0.792
bcl6b Gasterosteus aculeatus ENSGACG00000019349 N 0.792
ENSLOCG00000013298 Lepisosteus oculatus ENSLOCG00000013298 N 0.789
bcl6b Danio rerio ENSDARG00000069335 N 0.789
SNAPOd2T00000666001 Oikopleura dioica SNAPOd2T00000666001 N 0.782
bcl6b Oryzias latipes ENSORLG00000006659 N 0.780
ENSCSAVG00000006275 Ciona savignyi ENSCSAVG00000006275 N 0.774
ENSCING00000007627 Ciona intestinalis ENSCING00000007627 N 0.771