CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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znf1088
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000103189
T091862_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000132857
C2H2 ZF
66
88
FTCTQCGKSFGRKGYLEIHMRIH
ENSDARP00000132857
C2H2 ZF
94
116
FTCTHCGRSFNRSSSLNLHMRIH
ENSDARP00000132857
C2H2 ZF
122
144
FTCTQCGKSFNQSSHLNNHMKIH
ENSDARP00000132857
C2H2 ZF
150
172
FTCTQCGKSFNQLSYLNLHMRIH
ENSDARP00000132857
C2H2 ZF
178
200
FTCTQCGRSFNRSSSLNLHMRIH
ENSDARP00000132857
C2H2 ZF
206
228
FTCTQCGKSFNRSSHLNNHMKIH
ENSDARP00000132857
C2H2 ZF
234
256
FTCTQCGKSFSQSTYLNKHMRIH
ENSDARP00000132857
C2H2 ZF
262
284
FTCTQCEKSFNQSSSLNKHMKIH
ENSDARP00000132857
C2H2 ZF
290
312
FTCTQCGRSFNQSSHLNSHMNIH
ENSDARP00000132857
C2H2 ZF
318
340
FTCTLCGKSFSQSSSLNLHIMSH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf1089
Danio rerio
ENSDARG00000088847
N
0.817
BX649556.1
Danio rerio
ENSDARG00000100859
N
0.815