CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CR388042.1
(
Danio rerio
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDARG00000104048
T091947_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000137588
C2H2 ZF
82
104
YSCTRCRKSFSKKSNLDIHMRVH
ENSDARP00000137588
C2H2 ZF
110
132
YTCKQCGKRFGYIQGFENHMRIH
ENSDARP00000137588
C2H2 ZF
138
160
YTCQQCGKSFYHAGNFAAHQRIH
ENSDARP00000137588
C2H2 ZF
166
188
YTCQHCGKSFSKTGNLAVHMRIH
ENSDARP00000137588
C2H2 ZF
194
216
YSCSQCGKSFKQNVTLKIHMRTH
ENSDARP00000137588
C2H2 ZF
222
244
FTCTQCGKSISQKHYLDIHMRIH
ENSDARP00000137588
C2H2 ZF
250
272
YTCTECGKSFPYKGSLNHHMISH
ENSDARP00000137588
C2H2 ZF
278
300
FTCAQCGKSFTTKTSLMNHMDGH
ENSDARP00000137588
C2H2 ZF
306
328
FTCDQCGKSLTRKDSMKQHMKTH
ENSDARP00000137588
C2H2 ZF
334
356
FRCSECGKGFKCKRSLSTHLKLH
Links
Other
C2H2 ZF
family TFs
Other
Danio rerio
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
znf1072
Danio rerio
ENSDARG00000096226
N
0.814
znf1073
Danio rerio
ENSDARG00000095993
N
0.795
CR293532.2
Danio rerio
ENSDARG00000100922
N
0.791
znf1071
Danio rerio
ENSDARG00000098987
N
0.788