PRDM4 (Dasypus novemcinctus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDNOG00000032478 T092272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.827 1.000
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.827 1.000
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDNOP00000028273 C2H2 ZF 587 609
ENSDNOP00000028273 C2H2 ZF 615 637
ENSDNOP00000028273 C2H2 ZF 643 665
ENSDNOP00000028273 C2H2 ZF 671 693
ENSDNOP00000033262 C2H2 ZF 587 609
ENSDNOP00000033262 C2H2 ZF 615 637
ENSDNOP00000033262 C2H2 ZF 643 665
ENSDNOP00000033262 C2H2 ZF 671 693
ENSDNOP00000033262 C2H2 ZF 699 721
ENSDNOP00000033262 C2H2 ZF 727 748

Links

Other C2H2 ZF family TFs
Other Dasypus novemcinctus TFs

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57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action