CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Zfp12
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000005742
T092746_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF12
M04515_2.00
Homo sapiens
NVYGCKRTAACAARYAKSMCC
GGKSMTRYTTGTTAYMGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_HT-SELEX
0.820
0.980
ZNF12
M07611_2.00
Homo sapiens
BNYBYSTYNYNGCNGCNS
SNGCNGCNRNRASRVRNV
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF12.RCADE.OriginalMapping
0.820
0.980
ZNF12
M04516_2.00
Homo sapiens
NVYGCWRTAACGAGYABCMCC
GGKGVTRCTCGTTAYWGCRBN
SELEX
Yin et al.(2017)
ZNF12_eDBD_Methyl-HT-SELEX
0.820
0.980
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000005372
C2H2 ZF
259
281
YECRECGKSFCKKSKFIIHQRTH
ENSDORP00000005372
C2H2 ZF
287
309
YKCNQCGKSFCQKGTLTVHQRTH
ENSDORP00000005372
C2H2 ZF
315
337
YECTECGKNFYQKLHLIQHQRTH
ENSDORP00000005372
C2H2 ZF
343
365
YECSYCGKSFCQKTHLTQHQRTH
ENSDORP00000005372
C2H2 ZF
371
393
YVCHDCGKTFSQKSALNDHQKIH
ENSDORP00000005372
C2H2 ZF
399
421
YKCSECGKCFCRKSTLTTHLRTH
ENSDORP00000005372
C2H2 ZF
427
449
YECNECGKFFSRLSYLTVHYRTH
ENSDORP00000005372
C2H2 ZF
455
477
YECADCGKTFYLNSALMRHQRVH
ENSDORP00000005372
C2H2 ZF
483
505
YECNECGKLFSQLSYLTIHHRTH
ENSDORP00000005372
C2H2 ZF
511
533
YECSECGKTFYQNSALCRHRRIH
ENSDORP00000005372
C2H2 ZF
539
561
YECYICGKFFSQMSYLTIHHRIH
ENSDORP00000005372
C2H2 ZF
567
589
YECRECGKTFCQNSALNRHQRTH
ENSDORP00000005372
C2H2 ZF
595
617
YECYECGKCFSQMSYLTIHHRIH
ENSDORP00000005372
C2H2 ZF
623
645
FECNECGKAFSRMSYLTVHYRTH
ENSDORP00000005372
C2H2 ZF
651
673
YECMECGKKFYHKSAFNSHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy