SNAI1 (Equus caballus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSECAG00000009787 T093116_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
SNAI1
M04441_2.00
Homo sapiens
NVCACCTGYN

NRCAGGTGBN
SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX
0.805 0.945
SNAI1
M04443_2.00
Homo sapiens
TRCACCTGYN

NRCAGGTGYA
SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX
0.805 0.945
SNAI1
M08303_2.00
Homo sapiens
NNNNGCACCTGCYNB

VNRGCAGGTGCNNNN
ChIP-seq
Schmitges et al.(2016)
O95863.MEME
0.805 0.945
SNAI1
M08886_2.00
Homo sapiens
VCACCTGB

VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C
0.805 0.945
SNAI1
M10201_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q4
0.805 0.945
SNAI1
M10202_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q6
0.805 0.945
SNAI1
M04442_2.00
Homo sapiens
NRCACCTGYN

NRCAGGTGYN
SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX
0.805 0.945
SNAI1
M04444_2.00
Homo sapiens
YRCACCTGYN

NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX
0.805 0.945
Snai1
M00781_2.00
Mus musculus
NNNTGTCANN

NNTGACANNN
PBM
Weirauch et al.(2013)
pTH2340
0.805 0.934
Snai1
M09002_2.00
Mus musculus
VCACCTGB

VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C
0.805 0.934
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000007712 C2H2 ZF 155 177
ENSECAP00000007712 C2H2 ZF 181 203
ENSECAP00000007712 C2H2 ZF 209 231
ENSECAP00000007712 C2H2 ZF 237 258

Links

Other C2H2 ZF family TFs
Other Equus caballus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACLA_011410 Aspergillus clavatus CADACLAG00000780 N 0.000
AFUA_5G09170 Aspergillus fumigatus CADAFUAG00006512 N 0.000
AUEXF2481DRAFT_48715 Aureobasidium subglaciale AUEXF2481DRAFT_48715 N 0.000
CSUB01_10581 Colletotrichum sublineola CSUB01_10581 N 0.000
EURHEDRAFT_383582 Aspergillus ruber EURHEDRAFT_383582 N 0.000
FGRRES_07504 Fusarium graminearum FGRRES_07504 N 0.000
FPSE_11142 Fusarium pseudograminearum FPSE_11142 N 0.000
GLRG_11106 Colletotrichum graminicola GLRG_11106 N 0.000
M438DRAFT_371209 Aureobasidium pullulans M438DRAFT_371209 N 0.000
NFIA_078160 Neosartorya fischeri CADNFIAG00007835 N 0.000
Pc21g17100 Penicillium chrysogenum Pc21g17100 N 0.000
PCH_Pc21g17100 Penicillium rubens PCH_Pc21g17100 N 0.000
PDE_09386 Penicillium oxalicum PDE_09386 N 0.000
PDIP_49800 Penicillium digitatum PDIP_49800 N 0.000
PEX1_046860 Penicillium expansum PEX1_046860 N 0.000
U727_0043274301 Penicillium solitum U727_0043274301 N 0.000