CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZSCAN30
(
Equus caballus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSECAG00000017340
T093313_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZSCAN30
M08365_2.00
Homo sapiens
BCCWGSRGCCHBSVS
SBSVDGGCYSCWGGV
ChIP-seq
Schmitges et al.(2016)
Q86W11_1-5.RCADE
0.811
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000015030
C2H2 ZF
237
259
YVCLDCGKAFCQSSKLIRHQRIH
ENSECAP00000015030
C2H2 ZF
265
287
YACKECGKAFSLSSDLVRHQRIH
ENSECAP00000015030
C2H2 ZF
293
315
YECCDCGKAFRGSSELIRHRRIH
ENSECAP00000015030
C2H2 ZF
321
343
YECSECGKAFSRSSALIQHKKIH
ENSECAP00000015030
C2H2 ZF
349
371
YECPECGKAFGRSSILIEHQRIH
ENSECAP00000015030
C2H2 ZF
377
399
YECNECGKSFNQSSALTQHQRIH
ENSECAP00000015030
C2H2 ZF
405
427
YECRECRKTFRHRSGLMQHQRTH
Links
Other
C2H2 ZF
family TFs
Other
Equus caballus
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy