CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000004741
(
Ficedula albicollis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFALG00000004741
T094229_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF384
M04451_2.00
Homo sapiens
TTTTBNNNNNNNNNNNNVAAAA
TTTTBNNNNNNNNNNNNVAAAA
SELEX
Yin et al.(2017)
ZNF384_eDBD_HT-SELEX
0.807
0.940
ZNF384
M08306_2.00
Homo sapiens
CTTTTTTTT
AAAAAAAAG
ChIP-seq
Schmitges et al.(2016)
Q8TF68_1-3.RCADE
0.807
0.940
ZNF384
M08090_2.00
Homo sapiens
WTTTTTTTNHNN
NNDNAAAAAAAW
ChIP-seq
Mathelier et al.(2014)
MA1125.1
0.807
0.940
ZNF384
M08888_2.00
Homo sapiens
BVNNBTTTTTSC
GSAAAAAVNNBV
Misc
Kulakovskiy et al.(2013)
ZN384_HUMAN.H11MO.0.C
0.807
0.940
ZNF384
M10209_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CIZ_01
0.807
0.940
ZNF384
M04452_2.00
Homo sapiens
KTTTYHNNNNNNNNNNDRAAAV
BTTTYHNNNNNNNNNNDRAAAM
SELEX
Yin et al.(2017)
ZNF384_eDBD_Methyl-HT-SELEX
0.807
0.940
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000004930
C2H2 ZF
209
231
YRCRMCSLTFYSKSEMQIHSKSH
ENSFALP00000004930
C2H2 ZF
237
259
HKCPHCSKSFANSSYLAQHIRIH
ENSFALP00000004930
C2H2 ZF
265
287
YTCSYCQKAFRQLSHLQQHTRIH
ENSFALP00000004930
C2H2 ZF
298
320
HKCPHCSKSFANTSYLAQHLRIH
ENSFALP00000004930
C2H2 ZF
326
348
YTCRYCQKAFRQLSHLQQHTRIH
ENSFALP00000004930
C2H2 ZF
354
378
YKCAHPGCEKAFTQLSNLQSHRRQH
ENSFALP00000004930
C2H2 ZF
384
406
FKCHNCHRAYTDAASLEVHLATH
ENSFALP00000004930
C2H2 ZF
414
436
YTCSICSRAYTSETYLMKHMRKH
Links
Other
C2H2 ZF
family TFs
Other
Ficedula albicollis
TFs
51 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy