CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GTF3A
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000122034
T094879_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GTF3A
M08301_2.00
Homo sapiens
CTCCCATCC
GGATGGGAG
ChIP-seq
Schmitges et al.(2016)
Q92664_3-5.RCADE
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000370532
C2H2 ZF
40
64
FICSFPDCSANYSKAWKLDAHLCKH
ENSP00000370532
C2H2 ZF
70
94
FVCDYEGCGKAFIRDYHLSRHILTH
ENSP00000370532
C2H2 ZF
100
125
FVCAANGCDQKFNTKSNLKKHFERKH
ENSP00000370532
C2H2 ZF
132
156
YICSFEDCKKTFKKHQQLKIHQCQH
ENSP00000370532
C2H2 ZF
162
186
FKCTQEGCGKHFASPSKLKRHAKAH
ENSP00000370532
C2H2 ZF
189
213
YVCQKGCSFVAKTWTELLKHVRETH
ENSP00000370532
C2H2 ZF
218
239
LCEVCRKTFKRKDYLKQHMKTH
ENSP00000370532
C2H2 ZF
246
271
CRCPREGCGRTYTTVFNLQSHILSFH
ENSP00000370532
C2H2 ZF
277
301
FVCEHAGCGKTFAMKQSLTRHAVVH
ENSP00000389655
C2H2 ZF
40
64
FICSFPDCSANYSKAWKLDAHLCKH
ENSP00000389655
C2H2 ZF
70
94
FVCDYEGCGKAFIRDYHLSRHILTH
ENSP00000389655
C2H2 ZF
100
125
FVCAANGCDQKFNTKSNLKKHFERKH
ENSP00000389655
C2H2 ZF
132
156
YICSFEDCKKTFKKHQQLKIHQCQH
ENSP00000393050
C2H2 ZF
128
152
FVCDYEGCGKAFIRDYHLSRHILTH
ENSP00000393050
C2H2 ZF
158
183
FVCAANGCDQKFNTKSNLKKHFERKH
ENSP00000393050
C2H2 ZF
190
214
YICSFEDCKKTFKKHQQLKIHQCQH
ENSP00000393050
C2H2 ZF
220
244
FKCTQEGCGKHFASPSKLKRHAKAH
ENSP00000393050
C2H2 ZF
247
271
YVCQKGCSFVAKTWTELLKHVRETH
ENSP00000393050
C2H2 ZF
276
297
LCEVCRKTFKRKDYLKQHMKTH
ENSP00000393050
C2H2 ZF
304
329
CRCPREGCGRTYTTVFNLQSHILSFH
ENSP00000393050
C2H2 ZF
335
359
FVCEHAGCGKTFAMKQSLTRHAVVH
ENSP00000409175
C2H2 ZF
40
64
FICSFPDCSANYSKAWKLDAHLCKH
ENSP00000409175
C2H2 ZF
70
94
FVCDYEGCGKAFIRDYHLSRHILTH
ENSP00000409175
C2H2 ZF
100
125
FVCAANGCDQKFNTKSNLKKHFERKH
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GTF3A
Pan troglodytes
ENSPTRG00000005730
I
0.827
ENSNLEG00000000331
Nomascus leucogenys
ENSNLEG00000000331
I
0.827
GTF3A
Macaca mulatta
ENSMMUG00000009029
I
0.825
ENSCSAG00000017983
Chlorocebus sabaeus
ENSCSAG00000017983
N
0.825
ENSPANG00000012593
Papio anubis
ENSPANG00000012593
I
0.824
ENSPPYG00000005235
Pongo abelii
ENSPPYG00000005235
I
0.822
ENSMMUP00000011834
Macaca fascicularis
ENSMMUP00000011834
N
0.819
GTF3A
Callithrix jacchus
ENSCJAG00000019373
N
0.813
GTF3A
Otolemur garnettii
ENSOGAG00000014589
N
0.776
GTF3A
Tupaia belangeri
ENSTBEG00000012075
N
0.763
Myotis_brandtii_GTF3A_10026415
Myotis brandtii
Myotis_brandtii_GTF3A_10026415
I
0.761
GTF3A
Myotis lucifugus
ENSMLUG00000002158
I
0.761
GTF3A
Canis familiaris
ENSCAFG00000006794
I
0.760