CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SNAI3
(
Homo sapiens
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSG00000185669
T095234_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
SNAI3 is a member of the SNAIL gene family, named for the Drosophila snail gene, which plays roles in mesodermal formation during embryogenesis (Katoh and Katoh, 2003 [PubMed 12579345]).[supplied by OMIM, Apr 2009]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SNAI3
M04607_2.00
Homo sapiens
YRCACCTGYH
DRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI3_FL_HT-SELEX
(Direct)
(Direct)
SNAI3
M04608_2.00
Homo sapiens
YVCACCTGYH
DRCAGGTGBR
SELEX
Yin et al.(2017)
SNAI3_FL_Methyl-HT-SELEX
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSP00000327968
C2H2 ZF
152
174
FECFHCHKPYHTLAGLARHRQLH
ENSP00000327968
C2H2 ZF
183
205
FTCKYCDKEYTSLGALKMHIRTH
ENSP00000327968
C2H2 ZF
209
231
CTCKICGKAFSRPWLLQGHVRTH
ENSP00000327968
C2H2 ZF
237
259
YACSHCSRAFADRSNLRAHLQTH
ENSP00000327968
C2H2 ZF
265
286
YRCRRCTKTFSRMSLLARHEES
Links
Other
C2H2 ZF
family TFs
Other
Homo sapiens
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy