CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fezf2
(
Gasterosteus aculeatus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGACG00000011629
T095687_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FEZF1
M08307_2.00
Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN
ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE
0.824
0.964
FEZF1
M08889_2.00
Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH
Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C
0.824
0.964
erm
M03686_2.00
Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA
SELEX
Nitta et al.(2015)
CG31670_1
0.804
0.906
erm
M06128_2.00
Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM
B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375
0.804
0.906
erm
M06129_2.00
Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV
B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375
0.804
0.906
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGACP00000015381
C2H2 ZF
256
278
FTCEVCGKVFNAHYNLTRHMPVH
ENSGACP00000015381
C2H2 ZF
284
306
FVCKVCGKGFRQASTLCRHKIIH
ENSGACP00000015381
C2H2 ZF
312
334
HKCNQCGKAFNRSSTLNTHVRIH
ENSGACP00000015381
C2H2 ZF
340
362
FVCEFCGKGFHQKGNYKNHKLTH
ENSGACP00000015381
C2H2 ZF
368
390
YKCSICNKAFHQVYNLTFHMHTH
ENSGACP00000015381
C2H2 ZF
396
419
FTCATCGKGFCRNFDLKKHIRKLH
Links
Other
C2H2 ZF
family TFs
Other
Gasterosteus aculeatus
TFs
166 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy