CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF558
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000006642
T096227_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF558
M07620_2.00
Homo sapiens
HKGRAYHTGTRGRTKBATRYCTTYCAK
MTGRAAGRYATVMAYCYACADRTYCMD
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF558.RCADE.ReprocessedData
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000006498
C2H2 ZF
153
174
ECNQCFKVFSTKSNLTQHKRIH
ENSGGOP00000006498
C2H2 ZF
180
202
YDCSQCGKSFSSRSYLTIHKRIH
ENSGGOP00000006498
C2H2 ZF
208
230
YECNHCGKAFSDPSSLRLHLRIH
ENSGGOP00000006498
C2H2 ZF
236
258
YECNQCFHVFRTSCNLKSHKRIH
ENSGGOP00000006498
C2H2 ZF
264
286
HECNQCGKAFSTRSSLTGHNSIH
ENSGGOP00000006498
C2H2 ZF
292
314
YECHDCGKTFRKSSYLTQHVRTH
ENSGGOP00000006498
C2H2 ZF
320
342
YECNECGKSFSSSFSLTVHKRIH
ENSGGOP00000006498
C2H2 ZF
348
370
YECSDCGKAFNNLSAVKKHLRTH
ENSGGOP00000006498
C2H2 ZF
376
398
YECNHCGKSFTSNSYLSVHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy