CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGGOG00000010329
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000010329
T096336_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.826
0.997
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.826
0.997
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.826
0.997
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.826
0.997
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.826
0.997
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000010078
C2H2 ZF
148
170
YMCVECGKCFGRSSHLLQHQRIH
ENSGGOP00000010078
C2H2 ZF
176
198
YVCSVCGKAFSQSSVLSKHRRIH
ENSGGOP00000010078
C2H2 ZF
204
226
YECNECGKAFRVSSDLAQHHKIH
ENSGGOP00000010078
C2H2 ZF
232
254
HECLECRKAFTQLSHLIQHQRIH
ENSGGOP00000010078
C2H2 ZF
260
282
YVCPLCGKAFNHSTVLRSHQRVH
ENSGGOP00000010078
C2H2 ZF
288
310
HRCNECGKTFSVKRTLLQHQRIH
ENSGGOP00000010078
C2H2 ZF
316
338
YTCSECGKAFSDRSVLIQHHNVH
ENSGGOP00000010078
C2H2 ZF
344
366
YECSECGKTFSHRSTLMNHERIH
ENSGGOP00000010078
C2H2 ZF
372
394
YACYECGKAFVQHSHLIQHQRVH
ENSGGOP00000010078
C2H2 ZF
400
422
YVCSECGHAFSARRSLIQHERIH
ENSGGOP00000010078
C2H2 ZF
428
450
FQCTECGKAFSLKATLIVHLRTH
ENSGGOP00000010078
C2H2 ZF
456
478
YECNSCGKAFSQYSVLIQHQRIH
ENSGGOP00000010078
C2H2 ZF
484
506
YECGECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy