CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000012147
(
Latimeria chalumnae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLACG00000012147
T097087_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.769
0.930
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.769
0.930
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.769
0.930
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.769
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000013799
C2H2 ZF
284
309
QVCRWIDCNAMYDQQDELVRHIEKMH
ENSLACP00000013799
C2H2 ZF
318
345
FTCFWAGCVRRYKPFNARYKLLIHMRVH
ENSLACP00000013799
C2H2 ZF
352
375
KCMFEGCNKAFSRLENLKIHLRSH
ENSLACP00000013799
C2H2 ZF
381
405
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSLACP00000013799
C2H2 ZF
411
435
YACQIPGCTKRYTDPSSLRKHVKAH
Links
Other
C2H2 ZF
family TFs
Other
Latimeria chalumnae
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy