CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZNF48
(
Loxodonta africana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSLAFG00000008821
T097309_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLAFP00000007409
C2H2 ZF
82
103
VCGECGKSFRQMSDLVKHQRTH
ENSLAFP00000007409
C2H2 ZF
109
131
YKCGVCGKGFGDSSARIKHQRTH
ENSLAFP00000007409
C2H2 ZF
161
183
TICGECGKSFRQSSDLVKHQRTH
ENSLAFP00000007409
C2H2 ZF
189
211
YKCGICGKGFGDSSARIKHQRTH
ENSLAFP00000007409
C2H2 ZF
244
266
YICTDCGKRFVLSCSLLSHQRSH
ENSLAFP00000007409
C2H2 ZF
272
294
FGCDVCGKEFARGSDLVKHLRVH
ENSLAFP00000007409
C2H2 ZF
300
322
YLCPECGKGFADSSARVKHLRTH
ENSLAFP00000007409
C2H2 ZF
328
350
HACPECDRTFSLSSTLLRHRLTH
ENSLAFP00000007409
C2H2 ZF
427
449
HKCPDCGKGFRRSSDLVKHHRVH
ENSLAFP00000007409
C2H2 ZF
455
477
YLCPECGKGFADSSARVKHLRTH
ENSLAFP00000007409
C2H2 ZF
519
541
HVCGFCGKEFPRSSDLVKHRRTH
ENSLAFP00000007409
C2H2 ZF
547
569
YKCAECGKGFGDSSARIKHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Loxodonta africana
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF48
Pan troglodytes
ENSPTRG00000007999
N
0.826
ENSPPYG00000007271
Pongo abelii
ENSPPYG00000007271
N
0.826
ENSPANG00000016527
Papio anubis
ENSPANG00000016527
N
0.826
ZNF48
Bos taurus
ENSBTAG00000031806
N
0.826
Znf48
Rattus norvegicus
ENSRNOG00000017837
N
0.826
ZNF48
Sus scrofa
ENSSSCG00000007801
N
0.826
Myotis_brandtii_ZNF48_10014474
Myotis brandtii
Myotis_brandtii_ZNF48_10014474
N
0.826
ENSP00000417204
Macaca fascicularis
ENSP00000417204
N
0.826
ENSBTAP00000028273-D1
Bos grunniens
ENSBTAP00000028273-D1
N
0.826
Zfp553
Mus musculus
ENSMUSG00000045598
N
0.826
ENSNLEG00000015834
Nomascus leucogenys
ENSNLEG00000015834
N
0.826
ENSMPUG00000012333
Mustela putorius furo
ENSMPUG00000012333
N
0.826
ENSCSAG00000006039
Chlorocebus sabaeus
ENSCSAG00000006039
N
0.826
ZNF48
Cavia porcellus
ENSCPOG00000001104
N
0.826
ZNF48
Homo sapiens
ENSG00000180035
N
0.826
ZNF48
Felis catus
ENSFCAG00000028864
N
0.826
ZNF48
Macaca mulatta
ENSMMUG00000029159
N
0.826
ENSSTOG00000021915
Ictidomys tridecemlineatus
ENSSTOG00000021915
N
0.825
ZNF48
Procavia capensis
ENSPCAG00000009103
N
0.825
ZNF48
Canis familiaris
ENSCAFG00000029852
N
0.824
ZNF48
Callithrix jacchus
ENSCJAG00000002611
I
0.822
ZNF48
Tursiops truncatus
ENSTTRG00000017273
N
0.822
ZNF48
Oryctolagus cuniculus
ENSOCUG00000013651
N
0.822
Zfp553
Dipodomys ordii
ENSDORG00000013148
N
0.818