ENSLOCG00000008679 (Lepisosteus oculatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLOCG00000008679 T097691_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.817 0.982
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.817 0.982
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.811 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.811 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.811 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLOCP00000010556 C2H2 ZF 362 383
ENSLOCP00000010556 C2H2 ZF 389 411
ENSLOCP00000010556 C2H2 ZF 710 732
ENSLOCP00000010556 C2H2 ZF 738 760
ENSLOCP00000010567 C2H2 ZF 432 453
ENSLOCP00000010567 C2H2 ZF 459 481
ENSLOCP00000010567 C2H2 ZF 780 802
ENSLOCP00000010567 C2H2 ZF 808 830
ENSLOCP00000010567 C2H2 ZF 838 861

Links

Other C2H2 ZF family TFs
Other Lepisosteus oculatus TFs

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135 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action