Zscan4c (Mus musculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMUSG00000054272 T101295_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within negative regulation of mitotic recombination; regulation of transcription by RNA polymerase II; and telomere maintenance via telomere lengthening. Located in chromosome, telomeric region; cytoplasm; and nucleus. Is expressed in 1-cell stage embryo; 2-cell stage embryo; primary oocyte; and secondary oocyte. Orthologous to human ZSCAN4 (zinc finger and SCAN domain containing 4). [provided by Alliance of Genome Resources, Apr 2022]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zscan4c
M00147_2.00		 Mus musculus
NNTGTGCNN
NNGCACANN		 PBM
Badis et al.(2009)
Gm397_1753		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00147_2.00 C2H2 ZF 16 38
M00147_2.00 C2H2 ZF 46 67
M00147_2.00 C2H2 ZF 73 95
M00147_2.00 C2H2 ZF 101 124

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMUSP00000118506 C2H2 ZF 395 417
ENSMUSP00000118506 C2H2 ZF 425 446
ENSMUSP00000118506 C2H2 ZF 452 474
ENSMUSP00000118506 C2H2 ZF 480 503

Links

Other C2H2 ZF family TFs
Other Mus musculus TFs

Invalid Input OrderBy

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action