CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZKSCAN5
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000010899
T103506_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZKSCAN5
M07709_2.00
Homo sapiens
TCACCTCCN
NGGAGGTGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZKSCAN5.RCADE.OriginalMapping
0.819
0.964
Zkscan5
M00785_2.00
Mus musculus
NWYDHBDNHN
NDNHVDHRWN
PBM
Weirauch et al.(2013)
pTH2283
0.806
0.946
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000009756
C2H2 ZF
348
370
HRCNDCGKFFLQASNFIQHRRIH
ENSOGAP00000009756
C2H2 ZF
376
398
FKCGECGKSYNQRVHLTQHQRVH
ENSOGAP00000009756
C2H2 ZF
404
426
YKCQVCGKAFRVSSHLVQHHSVH
ENSOGAP00000009756
C2H2 ZF
432
454
YGCNECGKNFGRHSHLIEHLKRH
ENSOGAP00000009756
C2H2 ZF
545
567
HKCNECGKSFIQSAHLIQHQRIH
ENSOGAP00000009756
C2H2 ZF
573
595
FRCDECGKSYNQRVHLTQHQRVH
ENSOGAP00000009756
C2H2 ZF
601
623
YTCHLCGKAFRVRSHLVQHQSVH
ENSOGAP00000009756
C2H2 ZF
629
651
FKCNECGKGFGRRSHLAGHLRLH
ENSOGAP00000009756
C2H2 ZF
657
679
HQCHECGEIFFQYVSLIEHQVLH
ENSOGAP00000009756
C2H2 ZF
713
735
YKCDICGKTFSYSSDFIQHYRTH
ENSOGAP00000009756
C2H2 ZF
769
791
HQCNECGRGFTLKSHLNQHQRIH
ENSOGAP00000009756
C2H2 ZF
797
819
FQCKECGMSFSWSCSLFKHLRSH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy