CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF350
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000013266
T103544_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF350
M08396_2.00
Homo sapiens
NDGYYYTTTTWTDMYBHVNHN
NDNBDVRKHAWAAAARRRCHN
ChIP-seq
Schmitges et al.(2016)
Q9GZX5_2-8.RCADE
0.805
0.940
ZNF350
M08960_2.00
Homo sapiens
VDBBYYTTTTHWDHCYHN
NDRGDHWDAAAARRVVHB
Misc
Kulakovskiy et al.(2013)
ZN350_HUMAN.H11MO.0.C
0.805
0.940
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000011884
C2H2 ZF
205
227
HVCSECGKAFVKKSWLTDHQIIH
ENSOGAP00000011884
C2H2 ZF
233
255
HRCGLCGKAFSRKFMLTEHQRTH
ENSOGAP00000011884
C2H2 ZF
261
283
YECSECGKAFLKKSRLNIHQKTH
ENSOGAP00000011884
C2H2 ZF
289
311
YICSDCGKGFIQKGNLIVHQRIH
ENSOGAP00000011884
C2H2 ZF
317
339
YICSECGKGFIQKTCLIAHQRFH
ENSOGAP00000011884
C2H2 ZF
345
367
FVCSECGKSCSQKSGLIKHQRIH
ENSOGAP00000011884
C2H2 ZF
373
395
FQCSECGKAFTTKQKLIVHQRTH
ENSOGAP00000011884
C2H2 ZF
401
423
YACNECGKAFAYMSCLVKHKRIH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF350
Microcebus murinus
ENSMICG00000008103
I
0.816
ZNF350
Canis familiaris
ENSCAFG00000003371
I
0.809
ENSPANG00000012793
Papio anubis
ENSPANG00000012793
I
0.806
ZNF350
Macaca mulatta
ENSMMUG00000023137
I
0.806
ENSCSAG00000002005
Chlorocebus sabaeus
ENSCSAG00000002005
I
0.806
ENSMMUP00000030454
Macaca fascicularis
ENSMMUP00000030454
I
0.806
ZNF350
Pan troglodytes
ENSPTRG00000011402
I
0.805
ENSPPYG00000010330
Pongo abelii
ENSPPYG00000010330
I
0.805
ZNF350
Homo sapiens
ENSG00000256683
D
0.805
ZNF432
Callithrix jacchus
ENSCJAG00000002045
I
0.805
ENSNLEG00000005972
Nomascus leucogenys
ENSNLEG00000005972
I
0.804
ZNF350
Dasypus novemcinctus
ENSDNOG00000018413
I
0.801
ENSVPAG00000006670
Vicugna pacos
ENSVPAG00000006670
I
0.800
ENSBTAG00000037906
Bos taurus
ENSBTAG00000037906
I
0.788
ZNF350
Choloepus hoffmanni
ENSCHOG00000011218
I
0.759