CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOGAG00000014249
(
Otolemur garnettii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOGAG00000014249
T103558_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF684
M04428_2.00
Homo sapiens
NBACAGTCCACCCCTTDV
BHAAGGGGTGGACTGTVN
SELEX
Yin et al.(2017)
ZNF684_FL_HT-SELEX
0.775
0.945
ZNF684
M07574_2.00
Homo sapiens
CWCCCCTTK
MAAGGGGWG
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF684.RCADE.ReprocessedData
0.775
0.945
ZNF684
M08297_2.00
Homo sapiens
ACAGTCCACCCCTTB
VAAGGGGTGGACTGT
ChIP-seq
Schmitges et al.(2016)
Q5T5D7.MEME
0.775
0.945
ZNF684
M04429_2.00
Homo sapiens
DBACAGTCCACCCCTTDR
YHAAGGGGTGGACTGTVH
SELEX
Yin et al.(2017)
ZNF684_FL_Methyl-HT-SELEX
0.775
0.945
ZNF684
M08240_2.00
Homo sapiens
ACAGTCCACCCCTT
AAGGGGTGGACTGT
ChIP-seq
Najafabadi et al.(2015b)
ZNF684
0.775
0.929
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOGAP00000012769
C2H2 ZF
153
175
YECCECGKAFRKKFHFIRHEKYH
ENSOGAP00000012769
C2H2 ZF
181
203
FECNDCGKAYSRKANLATHQKIH
ENSOGAP00000012769
C2H2 ZF
209
231
FVCNDCGKAFMHKAQLVVHQRLH
ENSOGAP00000012769
C2H2 ZF
237
259
YECSQCGKTFTWNSSFNQHVKSH
ENSOGAP00000012769
C2H2 ZF
265
287
FECKECGKTFRYSSSLHKHSRFH
ENSOGAP00000012769
C2H2 ZF
293
315
YQCIVCGKAFGNTSVLVTHQRIH
ENSOGAP00000012769
C2H2 ZF
322
343
GCIQCGKAFVKKSHLLRHQITH
ENSOGAP00000012769
C2H2 ZF
349
371
YECNRCGKAFSQKSNLTVHQKIH
Links
Other
C2H2 ZF
family TFs
Other
Otolemur garnettii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy