CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ZFP28
(
Ochotona princeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSOPRG00000014306
T104634_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP28
M08378_2.00
Homo sapiens
DNNHNNHNHDDBMKYTCHDTTTCYTYWDNK
NAYMNHWRARGAAAHDGARMKVHHDNDNND
ChIP-seq
Schmitges et al.(2016)
Q8NHY6_2-12.RCADE
0.759
0.917
ZFP28
M08949_2.00
Homo sapiens
YTCTRTTTCTTCTKRWGTCA
TGACWYMAGAAGAAAYAGAR
Misc
Kulakovskiy et al.(2013)
ZFP28_HUMAN.H11MO.0.C
0.759
0.917
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOPRP00000013062
C2H2 ZF
314
336
FKCSECKKTFTQSSSLTVHQRIH
ENSOPRP00000013062
C2H2 ZF
342
364
YKCSECGKAFSDGSSFARHQRCH
ENSOPRP00000013062
C2H2 ZF
370
393
YECIECGKAFIQNTSLIRHWRYYH
ENSOPRP00000013062
C2H2 ZF
399
421
FDCIDCGKAFSDHIGLNQHRRIH
ENSOPRP00000013062
C2H2 ZF
427
449
YRCEVCDKSFRYGSSLTVHQRIH
ENSOPRP00000013062
C2H2 ZF
455
477
YECDVCRKAFSHHASLTQHQRVH
ENSOPRP00000013062
C2H2 ZF
483
505
FECKECGKAFRQNIHLASHLRIH
ENSOPRP00000013062
C2H2 ZF
511
533
FECGECGKSFSISSQLATHQRIH
ENSOPRP00000013062
C2H2 ZF
539
561
YECKVCSKAFTQKAHLAQHQKTH
ENSOPRP00000013062
C2H2 ZF
567
589
YECKECGKAFSQTTHLIQHQRVH
ENSOPRP00000013062
C2H2 ZF
595
617
YKCMECGKAFGDNSSCAQHQRLH
ENSOPRP00000013062
C2H2 ZF
623
645
YECVECGKAFKTKSSLICHRRSH
ENSOPRP00000013062
C2H2 ZF
651
673
YECSVCGKAFSHRQSLSVHQRIH
ENSOPRP00000013062
C2H2 ZF
679
701
YECKECRKAFIQIGHLNQHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Ochotona princeps
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy