CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSORLG00000003872
(
Oryzias latipes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSORLG00000003872
T104750_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS3
M02880_2.00
Homo sapiens
CTTYGTGGGGGGTM
KACCCCCCACRAAG
SELEX
Jolma et al.(2013)
GLIS3_1
0.812
0.930
GLIS3
M10169_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_01
0.812
0.930
GLIS3
M10170_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6_01
0.812
0.930
GLIS3
M10171_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZNF515_Q6
0.812
0.930
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000004835
C2H2 ZF
486
511
QVCRWIDCSAAYEQQEELVRHIEKVH
ENSORLP00000004835
C2H2 ZF
520
547
FTCFWAGCIRRYKPFNARYKLLIHMRVH
ENSORLP00000004835
C2H2 ZF
554
577
KCMFEGCNKAFSRLENLKIHLRSH
ENSORLP00000004835
C2H2 ZF
583
607
YLCQHPGCQKAFSNSSDRAKHQRTH
ENSORLP00000004835
C2H2 ZF
613
637
YACQISGCTKRYTDPSSLRKHVKIH
Links
Other
C2H2 ZF
family TFs
Other
Oryzias latipes
TFs
77 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy