ENSPPYG00000004913 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000004913 T106804_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PRDM4
M02881_2.00
Homo sapiens
TTTCAAGGCCCCC

GGGGGCCTTGAAA
SELEX
Jolma et al.(2013)
PRDM4_1
0.827 1.000
PRDM4
M04421_2.00
Homo sapiens
YRRCNGTTTCAAGKCYMCCC

GGGKRGMCTTGAAACNGYYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX
0.827 1.000
PRDM4
M04422_2.00
Homo sapiens
YRGCRGTTTCRAGGSTTVCC

GGBAASCCTYGAAACYGCYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1
0.827 1.000
PRDM4
M04423_2.00
Homo sapiens
YRRCRGTTTCRAGKSYNCCC

GGGNRSMCTYGAAACYGYYR
SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2
0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000005606 C2H2 ZF 590 612
ENSPPYP00000005606 C2H2 ZF 618 640
ENSPPYP00000005606 C2H2 ZF 646 668
ENSPPYP00000005606 C2H2 ZF 674 696
ENSPPYP00000005606 C2H2 ZF 702 724
ENSPPYP00000005606 C2H2 ZF 730 751

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action