CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000007036
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000007036
T106835_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF200
M00218_2.00
Homo sapiens
NRTMTCCNNN
NNNGGAKAYN
PBM
Barrera et al.(2016)
ZNF200_REF
0.825
0.991
ZNF200
M08273_2.00
Homo sapiens
RCTTCCGSBNBV
BVNVSCGGAAGY
ChIP-seq
Schmitges et al.(2016)
P98182_2-5.RCADE
0.825
0.991
ZNF200
M08232_2.00
Homo sapiens
AYTTCC
GGAART
ChIP-seq
Najafabadi et al.(2015b)
ZNF200
0.825
0.991
ZNF200
M00217_2.00
Homo sapiens
NNWCTCAWTWN
NWAWTGAGWNN
PBM
Barrera et al.(2016)
ZNF200_H322Y
0.781
0.983
ZNF200
M00219_2.00
Homo sapiens
NRYHTCCNNN
NNNGGADRYN
PBM
Barrera et al.(2016)
ZNF200_S265Y
0.779
0.983
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000007957
C2H2 ZF
251
273
YTCPLCGKQFNESSYLISHQRTH
ENSPPYP00000007957
C2H2 ZF
279
301
YDCSHCGKSFNHKTNLNKHERIH
ENSPPYP00000007957
C2H2 ZF
307
329
YSCSQCGKNFRQNSHRSRHEGIH
ENSPPYP00000007957
C2H2 ZF
335
357
FKCPECGKTFPKNEEFVLHLQSH
ENSPPYP00000007957
C2H2 ZF
363
385
YGCKKCGRRFGRLSNCTRHEKTH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy